Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00028 ATGTTCAAATTTCTGAAAAAGACTCAAAAGGGAGGATGGATGTCCTTGGGTGGAATTCTACTTTGTATAACAGGTTCAGAAGCCATGTATGCTGACTTAGGACACTTTTCACAATTGTCAATTAAGATTGCATTCACCTTTTTGGTGTACCCTTCCTTAATCCTAGCATATATGGGACAAGCTGCATATCTTTCAAGGCATCATTCCCTTGAAAGTGATTATCGAATTGGGTTCTATGTATCAGTACCTGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGAACTTTCTCAATAATCAAGCAATGTTCTGCTTTGGGATGTTTCCCCAAAGTCAAAATCATCCACACATCATCCAAGACTCATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAGTTGGATTTAGAGATACTAAACGCATGGGAAATGCAGCAGGCTTGGCTGTTATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTATGTTGGCACAAAAGCATTTTGCTGGCAATTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCAGCATCCCTGATCAAGTTCCTTGAGGGGGCTTGGGTCCCCATTGCCCTCTCATTCATCTTTCTCATTTCCATGTATGTATGGCATTATGGCACAATAAAGAAGTATGAGTTTGATGTTCAGAATAAGGTTCCAATCAACTGGCTCCTCAGTTTAGGCCCCACTCTAGGCATTGTCAGAGTCAAGGGAATTGGCCTCATACACACTGAGCTAGTATCTGGGATCCCAGCTATTTTCTCCCACTTTGTGACCAATCTCCCTGCCTTCCACCAAGTTGTTATCTTCCTCTGCATCAAGTCTGTCCAAGTGCCACATGTCAGACCAGAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAAGGAGTATAGGCTTTACAGGTGCATAGCCAGGTATGGCTACCGTGACATTCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTGTGCAGCATAGCAGAATTCATCAGATCAGACACCTCAGAATATGGCCTAGGATTGGGAAGTTTTGAAGAAGACACAAAGATGACAGTCGTTGGGACTTCAGCATCAAACTTAGAGGGTTCAATAAGGATGTCTGAAGATGATCAACAACAAGATTCTCAGATGGAAGGCCCCTCAGAATTGATGGAAGTTAAGCCTTCTCCAGAGAAAGTGAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCACAGATTGATTTTGAAACAAGAGAGGAGTTGCTTGAGCTAATGGAAGCAAAAGAGGCTGGAATGGCATTCATTCTTAGTCACTCATATGTTAGAGCAAAAAGTGGATCAAGCTGGTTGAAAAAAGTTGTCATCAATTATGGATATGATTTCTTAAGAAGAAACTCTAGAGGACCAACATATGCTTTAAGCATACCTCATGCATCTACCTTAGAGGTGGGCATGATCTACCATGTATGA 1566 0.4227 MFKFLKKTQKGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSRHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKTHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSILLAICFILFFGSIEALYFSASLIKFLEGAWVPIALSFIFLISMYVWHYGTIKKYEFDVQNKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVQVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSDTSEYGLGLGSFEEDTKMTVVGTSASNLEGSIRMSEDDQQQDSQMEGPSELMEVKPSPEKVRKRVRFVVPDSPQIDFETREELLELMEAKEAGMAFILSHSYVRAKSGSSWLKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00028 521 MobiDBLite consensus disorder prediction 402 425 - -
Vian8g00028 521 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 520 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian8g00028 521 Pfam K+ potassium transporter 2 348 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00028 Vian-Chr8 392673 395323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00028 1 521 Inorganic Solute Cotransporters AT5G14880 75.188 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00028 K03549 - gmx:100793387 989.564