Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00024 ATGGCAAGAGAACGGTCCTTTTACAGAGATTTTCTGCCAATTTTGGTGCTTCTTGGCACTGAATTCAATGACATGGGTTTACTCACACTCTTCAAAGTAGCCTCACTGCAAGGATTGAACAGCTATGTCTTTGTGGCCTATGCTTATGCTGTTGCAACCACTGTGCTTCTTCCTGTCACTTTTTTCCACAGAAGATCAAGGGTGGTTCCTCCACTCAGTTTCTCCACAGTATCCAAAATAGTTCTTCTTGGGGTGATAGGAAGTTCATCTCAGATACTGGGTTATGCAGGAATCAGCTATAGTTCTCCAGCTCTTGCTTCATCAATTGGCAATCTGGTGCCTGCTTTAACCTTTATCCTTGCCGTAATCTGCAGGATGGAAAAGTTAGCTGCTAAAAGTAGGAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATATCAGGTGCATTTGTTCTGACTTTCTACAAAGGACCATCAATCGTCAATGCTCACAAACATCTTTCCTTGTCACTTCAAGATCAAATTAACTTTCTTAAATCAGAGGATGCTAGCTGGGCCACTGGTGGCATTCTGCTGATAGCTGACTACATTCTGACTTCAGTATGGTACATTTTAGAGGAGGATATCTTGAGAGTGTTCCCGGATGAACTTACTCTAGTCTTGCTTTACAATGTCACTGCCACAATATTCACTGCAACTGTAGGTTTATTTGCTGAGCCAAGTGCTAGTGCTTGGAAAATAGGTCTAAATGTTTCACTGATCTCCATTGTTAGCTCAGGACTATTTGGAAAGTTAATGAGCAATGTAGTTTATGCCTGGACATTGAATTTAAAGGGGGCTGTCTTTGTAACATCCTTCAGGCCACTTCAAATTGTGATTGCAGTTGCAATGGGTGTTTTGTTCCTTGATGATACTCTGTACATTGGAAGCGTAGTTGGAGCCATAATAGTATCGATTGGTCTTTATGTTGTGTTGTGGGGCAAGGCAACAGAAGAGATTGAGGAAGTTGTTGGTGGCTTGGAATCACTAACTGCTGAGAATGTTCCTCTCTTGCAAAACCAGAGAACTGAAACATCAGAAAAGAATGTTTAA 1095 0.4137 MARERSFYRDFLPILVLLGTEFNDMGLLTLFKVASLQGLNSYVFVAYAYAVATTVLLPVTFFHRRSRVVPPLSFSTVSKIVLLGVIGSSSQILGYAGISYSSPALASSIGNLVPALTFILAVICRMEKLAAKSRSSQAKVMGSIISISGAFVLTFYKGPSIVNAHKHLSLSLQDQINFLKSEDASWATGGILLIADYILTSVWYILEEDILRVFPDELTLVLLYNVTATIFTATVGLFAEPSASAWKIGLNVSLISIVSSGLFGKLMSNVVYAWTLNLKGAVFVTSFRPLQIVIAVAMGVLFLDDTLYIGSVVGAIIVSIGLYVVLWGKATEEIEEVVGGLESLTAENVPLLQNQRTETSEKNV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00024 364 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Vian8g00024 364 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016020|GO:0022857
Vian8g00024 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 329 - -
Vian8g00024 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00024 Vian-Chr8 339060 342057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00024 1 332 Nodulin-like Gene Family AT3G28050 48.048 1.90e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00024 - - gmx:100790743 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00024 8 339060 342057 Vian8g00024 8 339060 342057 ECH