Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00023 ATGAGAATCCCACAGCTTTCCAACACTGACTTTACCCTTTTGGTAATTCCTATGATAATTTATATTAGAGAGTGGAACCAGTTTTGTTTTGGTGAAACCAACCTTAAACTCATTTTCTCTTTCAAAAAGTTTCCATTTTTACAACCTACCACTTTTCTACCAATGTGCAAGTTTTATAAGCTTATAATCAAGAAAGGAAAATTTTGGTTGCAACCAATTTTGATTTTACTTACAGACACATTCTTTTGTTTTTTCTTGTCAATTTACCACCACAAATTAAGGATGGAAAAGATAGTCATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCGATATCAGGTGCATTTATTGTGACTTTCTACAAAGGTCAATCGATCATCATCGCTGATAATTCCCCTTCAATTCAACTTTCACAATCAAATGGCATTCTTGCTTCAGTAGACACAAATTGGACCTTTGGTGGTCTTCTGCTGACAGCTTGCAATATACTGCTTACTATATGGTTTATTTTACAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTATGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGGGGAGAAAAATTCAAGTGCGTGGAAAATAAGACCAGACATATCCCTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCTTGAGTAGTGCAATATATGCCTGGGGAATACACCTAAAGGGGCCTGTATATGTAGCTATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATATTGGAAGTTTGATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGAAGATGTTGGTAGCCAAGAATCACCAATCACTGAGAATGTTCCTCTCTTGCAAAGCTATGCAACTGTAAATTCTACAAAGAAAATAGATGCAAGAGTATAA 1020 0.3647 MRIPQLSNTDFTLLVIPMIIYIREWNQFCFGETNLKLIFSFKKFPFLQPTTFLPMCKFYKLIIKKGKFWLQPILILLTDTFFCFFLSIYHHKLRMEKIVIRSRTTQAKIWGSIISISGAFIVTFYKGQSIIIADNSPSIQLSQSNGILASVDTNWTFGGLLLTACNILLTIWFILQVEILKEFPDELTMVFFYNLYAAIVASIVGLIGEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYIGSLIGGTVISIGFYTVMWGKATEQKEEEEDVGSQESPITENVPLLQSYATVNSTKKIDARV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00023 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 202 299 - -
Vian8g00023 339 PANTHER WAT1-RELATED PROTEIN 82 306 IPR030184 GO:0016020|GO:0022857
Vian8g00023 339 Pfam EamA-like transporter family 158 295 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian8g00023 Vian-Chr8 330196 333134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00023 94 316 Nodulin-like Gene Family AT5G40240 46.256 1.58e-71 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00023 - - gmx:100811686 431.795