Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian8g00007 | ATGGCATCAGGCGGAACCGAGGCCTTTCCAGATTTGGGTAAACACTGCCAACACAGCGATTGCCACCAACTCGATTTTCTTCCTTTCACATGCCAAGGTTGCCAAAAGGTGTTTTGTTTGGAGCACAGATCCTTCAAGTCTCACGCGTGCAAGAATTCCGACCACAACAGCAGAAAAGTGGTTGTCTGCGAAACGTGTTCCATGTCCATTGAGACCACCGGCTATGTGGGACAGGAAGAGGAGGCAATCTTGGAGAAGCACCTAAAGTCTGGGAACTGTGATCCCACCAAGAAGAAGAAACCCGTTTGCCCTGTCAAGCGCTGCAAGGAGGTTTTGACTTTCTCCAACACCAGTACCTGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTCCCTGCTGATCATGCTTGCAGCCGAGGAGTTTCAGCTTCTTCCTCATCCTCTGTTGCTGATAGTGGATGGAAGAATCGGTTTTTGGCTGCTTTAGGTTTAAGGGCTGGACAGAACTGTGCCAAAACTGGTTCATCTCGTTCTACCTCTCCTCCTAGCACTCCTTCTGTCAAGGCCTATTGA | 579 | 0.494 | MASGGTEAFPDLGKHCQHSDCHQLDFLPFTCQGCQKVFCLEHRSFKSHACKNSDHNSRKVVVCETCSMSIETTGYVGQEEEAILEKHLKSGNCDPTKKKKPVCPVKRCKEVLTFSNTSTCKTCHIKVCLKHRFPADHACSRGVSASSSSSVADSGWKNRFLAALGLRAGQNCAKTGSSRSTSPPSTPSVKAY | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian8g00007 | 192 | Gene3D | - | 79 | 157 | IPR035896 | - | |
Vian8g00007 | 192 | ProSiteProfiles | Zinc finger AN1-type profile. | 97 | 147 | IPR000058 | GO:0008270 | |
Vian8g00007 | 192 | MobiDBLite | consensus disorder prediction | 172 | 192 | - | - | |
Vian8g00007 | 192 | SMART | AN1_Zf_4 | 16 | 55 | IPR000058 | GO:0008270 | |
Vian8g00007 | 192 | SMART | AN1_Zf_4 | 103 | 144 | IPR000058 | GO:0008270 | |
Vian8g00007 | 192 | SUPERFAMILY | AN1-like Zinc finger | 95 | 144 | IPR035896 | - | |
Vian8g00007 | 192 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 8 | 184 | - | - | |
Vian8g00007 | 192 | SUPERFAMILY | AN1-like Zinc finger | 9 | 58 | IPR035896 | - | |
Vian8g00007 | 192 | Gene3D | - | 2 | 69 | IPR035896 | - | |
Vian8g00007 | 192 | Pfam | AN1-like Zinc finger | 103 | 140 | IPR000058 | GO:0008270 | |
Vian8g00007 | 192 | Pfam | AN1-like Zinc finger | 16 | 53 | IPR000058 | GO:0008270 | |
Vian8g00007 | 192 | ProSiteProfiles | Zinc finger AN1-type profile. | 10 | 58 | IPR000058 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian8g00007 | Vian-Chr8 | 100577 | 101602 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian8g00007 | 1 | 172 | C2H2 Transcription Factor Family | AT3G28210 | 61.628 | 4.67e-77 | 227 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian8g00007 | - | - | gmx:100500384 | 330.872 |