Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian8g00007 ATGGCATCAGGCGGAACCGAGGCCTTTCCAGATTTGGGTAAACACTGCCAACACAGCGATTGCCACCAACTCGATTTTCTTCCTTTCACATGCCAAGGTTGCCAAAAGGTGTTTTGTTTGGAGCACAGATCCTTCAAGTCTCACGCGTGCAAGAATTCCGACCACAACAGCAGAAAAGTGGTTGTCTGCGAAACGTGTTCCATGTCCATTGAGACCACCGGCTATGTGGGACAGGAAGAGGAGGCAATCTTGGAGAAGCACCTAAAGTCTGGGAACTGTGATCCCACCAAGAAGAAGAAACCCGTTTGCCCTGTCAAGCGCTGCAAGGAGGTTTTGACTTTCTCCAACACCAGTACCTGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTCCCTGCTGATCATGCTTGCAGCCGAGGAGTTTCAGCTTCTTCCTCATCCTCTGTTGCTGATAGTGGATGGAAGAATCGGTTTTTGGCTGCTTTAGGTTTAAGGGCTGGACAGAACTGTGCCAAAACTGGTTCATCTCGTTCTACCTCTCCTCCTAGCACTCCTTCTGTCAAGGCCTATTGA 579 0.494 MASGGTEAFPDLGKHCQHSDCHQLDFLPFTCQGCQKVFCLEHRSFKSHACKNSDHNSRKVVVCETCSMSIETTGYVGQEEEAILEKHLKSGNCDPTKKKKPVCPVKRCKEVLTFSNTSTCKTCHIKVCLKHRFPADHACSRGVSASSSSSVADSGWKNRFLAALGLRAGQNCAKTGSSRSTSPPSTPSVKAY 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian8g00007 192 Gene3D - 79 157 IPR035896 -
Vian8g00007 192 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Vian8g00007 192 MobiDBLite consensus disorder prediction 172 192 - -
Vian8g00007 192 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Vian8g00007 192 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Vian8g00007 192 SUPERFAMILY AN1-like Zinc finger 95 144 IPR035896 -
Vian8g00007 192 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 184 - -
Vian8g00007 192 SUPERFAMILY AN1-like Zinc finger 9 58 IPR035896 -
Vian8g00007 192 Gene3D - 2 69 IPR035896 -
Vian8g00007 192 Pfam AN1-like Zinc finger 103 140 IPR000058 GO:0008270
Vian8g00007 192 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Vian8g00007 192 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian8g00007 Vian-Chr8 100577 101602 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian8g00007 1 172 C2H2 Transcription Factor Family AT3G28210 61.628 4.67e-77 227
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian8g00007 - - gmx:100500384 330.872