Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02095 ATGTTCTCAAAACTTCATCCACAGCACCAACCGTTTCAGTTCTCTCGGGAATGTCAAACATCCGAGGAGGATGACAGCCGGAGTAACGGGGGACCCAACCTCGCGGCCCAGAAGCCCGTCTCCACAGGGGATGGAGCTACAATTGAAGTAGTGCGGAGGCCCAGGGGCCGCCCTCCGGGCTCCAAAAACAAGCCCAAGCCGCCTCTTATTATTACCCGCGAGCCAGACCCCTCCATGAGCCCCTTCATTTTAGAAATCCCCGGCGGAAACGACGTCGTGGATGCCCTAGCCCGGTTCAGCCACAGAAAGAACACGAGCCTCTGTGTCCTCAACGGTTCGGGAACAGTCGGTAACGTCACTCTCCGCCAACCCTCCGTCGCTCCCGTCGGCACTGTTACCTTCCATGGCCGCTTCGACATCCTCTCCATGTCCGCCACCTTCCTCCTCCACGCAACCCTGCCGTCGGCCTCTCCCTCTACCTTCGCCGTCTCGCTCGCCGGACCGCAGGGGCAGATCGTCGGCGGACACGTCGCTGGAGGGCTGCTCGCTGCTGGGACGGTGTTCATCGTCGCCGCGTCGTTCAACAACCCCTCCTTCCACCGGCTCTCGTCAGAGGACGACGCGCAGAATAGCTCCGCGTCCGGCGGCGGTGTCGGCGATGCGCAATCGCCGCCTGCCTCTACTGGCGGCGCGGAGAGCGGACAACTTCCGGCGGAGTCGTGTATGTACAGCTGTCACCTCCCTTCGGATGTGATTTGGGCTCCGACGGCCAGACCACCTTTCTGA 786 0.6221 MFSKLHPQHQPFQFSRECQTSEEDDSRSNGGPNLAAQKPVSTGDGATIEVVRRPRGRPPGSKNKPKPPLIITREPDPSMSPFILEIPGGNDVVDALARFSHRKNTSLCVLNGSGTVGNVTLRQPSVAPVGTVTFHGRFDILSMSATFLLHATLPSASPSTFAVSLAGPQGQIVGGHVAGGLLAAGTVFIVAASFNNPSFHRLSSEDDAQNSSASGGGVGDAQSPPASTGGAESGQLPAESCMYSCHLPSDVIWAPTARPPF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02095 261 Gene3D - 80 212 - -
Vian7g02095 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 229 IPR014476 GO:0003680
Vian7g02095 261 MobiDBLite consensus disorder prediction 202 218 - -
Vian7g02095 261 MobiDBLite consensus disorder prediction 1 17 - -
Vian7g02095 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 196 IPR005175 -
Vian7g02095 261 MobiDBLite consensus disorder prediction 1 76 - -
Vian7g02095 261 CDD DUF296 81 194 IPR005175 -
Vian7g02095 261 PIRSF ESCAROLA 1 252 IPR014476 GO:0003680
Vian7g02095 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 206 - -
Vian7g02095 261 ProSiteProfiles PPC domain profile profile. 76 215 IPR005175 -
Vian7g02095 261 MobiDBLite consensus disorder prediction 202 236 - -
Vian7g02095 261 FunFam AT-hook motif nuclear-localized protein 80 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02095 Vian-Chr7 36854796 36855581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g02095 42 260 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.609 9.14e-92 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02095 - - gmx:100811053 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02095 7 36854796 36855581 Vian7g02095 7 36854796 36855581 ECH
Vian7g02095 7 36854796 36855581 Vian4g01224 4 24230640 24232583 PCT