Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02091 ATGGTTGTTTTCTTCAAGCCAATCAAGTTTGCAATAGCATTTACTCATTTGCTTTCACTTGGAAGGTCTGGGTTGCACAAGAAATGCCATCTCTGTGAAAGCTGCTCTGCAATTTACCGAAGGCTTTTGCCCTTCGGTAAATGCCCACTGTTGGTCATTACCGAAGGCTTCTGCCCTTCGGTAAATACCCTCGTTTGGTCATTACCGAAGGCTTCTGCCCTTCGATTCTACGGCTTCCAGAGTTGGCTAGACCACGACTCTACCCACGTCCCCAACACTTTCATTAAACGGTCAGTGGAGTTCGACGGCACCAGATCAAAAGCCGACCGCAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACTCTCACCTATCCACCTTACGATCCCTCCTTCCTAACGCCGCCAAGTCGGATAAAGCGTCGTTGCTGGCGGAAGTTGTTGAGCACGTGAAACGGTTAAAGAAGCAGGCCGCTGAAGTGGCGTGCGTGGACGGCGGCGAACCAGGTGCGGTTCGGTCTGAGGCGTGGCCGCTTCCCGGGGAGTGCGACGAGGCGACGGTGAGTTGGTGCGAGGGGGAGGCGAATAGGGTAAAGGCGACAGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGCGACGTGACACGGGCAATCCGGTCGGTTCAGGCAAAGCCGGTTCGCGCGGAAATGATGACGGTTGGGGGAAGGACGAAGAGTGTGGTGGTGGTGGAGTGGGGTGAAGAGGAGGTGGAGGTTGGGGCGCTGGAACGGGCTTTGAAGGCCATAGTGGAGAATCGGGCTTTGGTGGGCTTTGGAATGGGCCCTATTGTTTTGGGCCAGAAACGGGGTAGGGATTGTTGCGGTTCGCCTACTTCTTCTTGA 909 0.5556 MVVFFKPIKFAIAFTHLLSLGRSGLHKKCHLCESCSAIYRRLLPFGKCPLLVITEGFCPSVNTLVWSLPKASALRFYGFQSWLDHDSTHVPNTFIKRSVEFDGTRSKADRKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLAEVVEHVKRLKKQAAEVACVDGGEPGAVRSEAWPLPGECDEATVSWCEGEANRVKATVCCEDRAGLNRDVTRAIRSVQAKPVRAEMMTVGGRTKSVVVVEWGEEEVEVGALERALKAIVENRALVGFGMGPIVLGQKRGRDCCGSPTSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02091 302 SMART finulus 120 169 IPR011598 GO:0046983
Vian7g02091 302 Gene3D - 108 172 IPR036638 GO:0046983
Vian7g02091 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
Vian7g02091 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 169 IPR036638 GO:0046983
Vian7g02091 302 Gene3D - 204 277 - -
Vian7g02091 302 Pfam Helix-loop-helix DNA-binding domain 116 163 IPR011598 GO:0046983
Vian7g02091 302 SUPERFAMILY ACT-like 207 273 IPR045865 -
Vian7g02091 302 PANTHER TRANSCRIPTION FACTOR BHLH30 98 293 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02091 Vian-Chr7 36039755 36043142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g02091 109 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 40.722 5.77e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian7g02091 HLH 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02091 - - gmx:100816394 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02091 7 36039755 36043142 Vian7g02091 7 36039755 36043142 ECH