Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02082 ATGGCTAAAGAGGTTAACAAGCAAAGAAGGGTTAAGGTTCCTTTCAGCGCAGAAGACACTGCTTCTCTGTTGCAAAGATACGATGCACCAACGGTTTTGACGTTGCTTCAGGAATTGGCCAATTATCCGTATTCCAAGTTTAACTGGAATGATTTGGCGGCCAAAACTTCAACCGGAATTTCTAATGCTAGAGAGTATCAAATGCTGTGGCGACATTTGGCGTATGGTCACTCCATGGCAAATTTGGATGACGATGCTCAACCTTTGGATGATGACAGTGACTTGGAGAGTGAACGAGAACCATTACCTCGCTTAAACAGGGAAACTGCAACCGAAGCTGCAGCATTTGTTAAGGTAATTATGGCATCTTTTAAACTGGGTGAATCCAGTGCTACTAGTTCAGTGATTCAAGCTCCGTTGACTATAAATACTCCCTCTACCATTGATAAGAATGAAAGTTCGAGCAACACCGATATTATTTTTCCAGTAACAGTGAAGAGACAGACACTGCCAAATACATCATCAACAAGAGTGGTAGAAGGCAATGGTTCAGTCAGAAGTAGCACATCTATTAAAAAGAAAAGAGAACCATGGTCAGAGCAAGAGGATCTGCAATTACGAGATGCCGTTCAGAGGTGGGGTGAAGGTAACTGGGCAACTATGATTAAAAAAGACGACTTTCCTATCAAGAGAAGCACCTCACAATTATCTAAGGTGTTTTAA 723 0.4191 MAKEVNKQRRVKVPFSAEDTASLLQRYDAPTVLTLLQELANYPYSKFNWNDLAAKTSTGISNAREYQMLWRHLAYGHSMANLDDDAQPLDDDSDLESEREPLPRLNRETATEAAAFVKVIMASFKLGESSATSSVIQAPLTINTPSTIDKNESSSNTDIIFPVTVKRQTLPNTSSTRVVEGNGSVRSSTSIKKKREPWSEQEDLQLRDAVQRWGEGNWATMIKKDDFPIKRSTSQLSKVF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02082 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 219 IPR017930 -
Vian7g02082 240 Gene3D - 187 239 - -
Vian7g02082 240 MobiDBLite consensus disorder prediction 177 199 - -
Vian7g02082 240 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 237 - -
Vian7g02082 240 MobiDBLite consensus disorder prediction 83 102 - -
Vian7g02082 240 SUPERFAMILY Homeodomain-like 190 224 IPR009057 -
Vian7g02082 240 ProSiteProfiles Myb-like domain profile. 190 240 IPR001005 -
Vian7g02082 240 CDD SANT_TRF 197 237 - -
Vian7g02082 240 Pfam Myb-like DNA-binding domain 195 221 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02082 Vian-Chr7 35533493 35537556 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian7g02082 Myb_DNA-binding 7.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02082 - - gmx:100819057 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02082 7 35533493 35537556 Vian7g02082 7 35533493 35537556 ECH
Vian7g02082 7 35533493 35537556 Vian4g01702 4 33119830 33128884 PCT