Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02050 ATGGATTCCCGCGACTCCTCCCCCCGCTCCCGCGACCCCGACGCCGACAACCACCACCACCACTCCTTCGACGAGCCCCCGCCCTCCCTCCATTCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCCGAATCCAGCCTCGCCCCCACGACAACCACCTTACCTACGTCGCCGGCGACACCAAGATCCTCGCCGTAGACCGCCACATCAAGCTCCCCGCCCTCCTCACCAAACTCTCCTCCCTCGCCAACGCCCCCGCCAATGATACCTTCTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCTCTAATCTCCGTCACCAACGACGAAGACCTCCACCATATGATGCTCGAGTACGATCGCCTCTGCCGCACCTCGCCCAGACCCGCACGCCTCCGCCTCTTTCTGTTCTCGCTCCACAACAATAATAGCAACAACAGCAACATCAATTTCGCACTCACCGATCCCAAACCCGAGCGGCAGTGGTTCGTCGACGCTCTGAATTCCGTTCAGGTTCCGCTTGTCGAAGGTTCTTCGCCGCCGCAAACGGCAGCGCCAAATCCAGATTTTCTCTTCGGATTGGATAAGCAGCCGTCGGCGGCTGCCAATGCTCCTACGAAGAATCCTTCGCCGGAAACGGAATGCATCTCCGAGGATCGTCCAGCGTTCAGAGATGCCGAAACCGAAACGGAACGCGCGCCCGAGTCCGAGATTCGGAGGTTGCAGATTGGTCACAATACTGAGCAGCAACTCCTGCAACGGAAGATGAAAATAGAGGAAGATAATAACGGTAGGGTTAACGGCGCGGACGGTTTCTCTCAAAAGAAGACGGAGAATGTGACGCCGTTAGTTACGCAAGGACAAATGCAGGCGCAAGGTTTTCATTCTGGAACGGTGTCGTTTTTGCAGGAGAGGAATAATATGGGCTATTCGCTGGCGGTTCCTTCGACCGGGAGTGAGATTTATCTCATTCAGACGCCTTCTGGAATCTTCCAAGCGGTTCGGCCCGTGACTGGACCGGTTGGGCAACCGGTTTATCTGGTTCCGGCGCCTAGTTCAGTTGGCGTGGCGGCGGAGCGTGGATATTCTGCGGGACAGGGAGGAGCGCGGTGGTGA 1116 0.5797 MDSRDSSPRSRDPDADNHHHHSFDEPPPSLHSKVKLMCSYGGRIQPRPHDNHLTYVAGDTKILAVDRHIKLPALLTKLSSLANAPANDTFFKYQLPGEDLDALISVTNDEDLHHMMLEYDRLCRTSPRPARLRLFLFSLHNNNSNNSNINFALTDPKPERQWFVDALNSVQVPLVEGSSPPQTAAPNPDFLFGLDKQPSAAANAPTKNPSPETECISEDRPAFRDAETETERAPESEIRRLQIGHNTEQQLLQRKMKIEEDNNGRVNGADGFSQKKTENVTPLVTQGQMQAQGFHSGTVSFLQERNNMGYSLAVPSTGSEIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPSSVGVAAERGYSAGQGGARW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02050 371 PANTHER OS05G0427100 PROTEIN-RELATED 2 266 - -
Vian7g02050 371 MobiDBLite consensus disorder prediction 213 236 - -
Vian7g02050 371 MobiDBLite consensus disorder prediction 177 236 - -
Vian7g02050 371 CDD PB1_UP2 37 137 - -
Vian7g02050 371 Pfam PB1 domain 50 137 IPR000270 GO:0005515
Vian7g02050 371 SMART PB1_new 48 139 IPR000270 GO:0005515
Vian7g02050 371 Gene3D - 54 139 - -
Vian7g02050 371 MobiDBLite consensus disorder prediction 1 28 - -
Vian7g02050 371 MobiDBLite consensus disorder prediction 1 30 - -
Vian7g02050 371 SUPERFAMILY CAD & PB1 domains 49 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02050 Vian-Chr7 34457817 34458932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g02050 33 213 MAP Kinase Kinase Kinase AT3G46920 35.294 2.80e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02050 - - vra:106764239 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02050 7 34457817 34458932 Vian7g02050 7 34457817 34458932 ECH