Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g02021 ATGGCCACCAACCGTGGTGTCCTCTCGACACTTGACAAAGCCAAGACAAAAAGATATCACTATAAGGTAATTGGGATAGCGGGGATGGGGTTCTTCACTGATGCATATGATCTCTTTTGCATCACTGCACTTATCAAGCTCATAGGTCGCCTGTACTACTATGACCCCATGAGTCACAGTCCAGGTAAGCTTCCAAAGAATGTAAGCAATGCAATAGCAGGAGTTGCATTGTGTGGCATCCTTTCAGGGCAGCTCTTCTTTGGCTGGCTGGGTGACAAACTCGGCCGAAAAAAGGTTTATGGCATAACCCTTTCCACCATGGTGGGGTGTGCCTTGGCATCAGGGCTTTCTTTTGGCTCCACAGCCAAAAGTGTGGTTGCTAGTCTTTGCTTCTTCAGGTTTTGGCTAGGATTTGGCATAGGAGGAGACTATCCTCTCTCAGCTGTTATAATGTCTGAATATGCCAATCAGAAGACTAGGGGAGCTTTTGTTGCTGCTGTTTTTGCTATGCAAGGAGTGGGAATATTGTTTGCTGGAGGTGTATCCATGTTGGTCTCCAAACTGTTCCTATTAGCTTATCCAGCCAGCGTTTTTGCAGTTGATCCAGTGCAATCTACTCAGCCACAAGGAGACTTTGTTTGGAGAATAGTGCTAATGTTTGGTGCATTTCCTGCTGCCTTCACTTATTACTGGAGAATGAAACTGCCAGAAACTGCAAGGTACACTGCCTTAGTGGAAGGAAATCACAATAAAGCGGTTGAAGATATGGCTAAAGTTCTTGAAAATGATATACCTTTAGAAGAATCAAATACCAGGGTTGCTGCCACACCTAGCCTCTCTTATGGATTCTTCTCTTCAAAGTTTCTTGAGAAGCACGGCCTTCACCTTTTAGGAACAACCAGCACCTGGTTCTTCTTGGATATTGCCTTCTACAGTCTTCAGCTAGCACAAAAAGATATTTACCATGCAAGTGGATTTTTACCCGGTGCTTCCCAAATGAATGCCATAGAGGAGGTATTTCTACTCTCCAAAGCAATGTTTGCAGTGGCACTGTTTGCCACTGTCCCTGGATACTGGTGCACAGTGTACTTCATTGACAAGATTGGAAGGTACAAAATCCAACTTGGCGGATTTTTTGCTATGTCTGTTTGCATGTTGGTTTTGGGACTCAATTATCCAGAATATAGGGGAGATGAATGCAACCCAGATGAAACATATGATTATTGTGGTGGCAAACACACCCTCTTTGTCATTCTTTTTGAAGTCACCCTTTTCTTTGCAAACTTTGGACCCAATAGCACAACATTTATAGTGCCAGCAGAGCTGTTCCCTGCCAGGTTCCGTTCAACATGCCATGGAATATCAGCAGCAGCTGGTAAAGCAGGAGCTATCATTGGTGCTTTTGTTGTGCAAAGCTATACAAGTAATCCGCAAGACGAATCAGAAGGTATCAAGACCGCACTTATGGCACTTTCAGTTGTCAATATGCTAGGATTCCTCTGCACTTTCTTAGTGCCAGAAACACGAGGCCGGTCACTTGAAGAAATCTCTGGAGAAGATAAAGAACTCACTGGCAATATTGCTCAAGAATATGCAAACGATAAAACAACTGATACAGAAAAGGAAACCAAAAACTCTAACGCTGATATAAGTCCAGCAAACTCAGTGGTTTAG 1674 0.4373 MATNRGVLSTLDKAKTKRYHYKVIGIAGMGFFTDAYDLFCITALIKLIGRLYYYDPMSHSPGKLPKNVSNAIAGVALCGILSGQLFFGWLGDKLGRKKVYGITLSTMVGCALASGLSFGSTAKSVVASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILFAGGVSMLVSKLFLLAYPASVFAVDPVQSTQPQGDFVWRIVLMFGAFPAAFTYYWRMKLPETARYTALVEGNHNKAVEDMAKVLENDIPLEESNTRVAATPSLSYGFFSSKFLEKHGLHLLGTTSTWFFLDIAFYSLQLAQKDIYHASGFLPGASQMNAIEEVFLLSKAMFAVALFATVPGYWCTVYFIDKIGRYKIQLGGFFAMSVCMLVLGLNYPEYRGDECNPDETYDYCGGKHTLFVILFEVTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTSNPQDESEGIKTALMALSVVNMLGFLCTFLVPETRGRSLEEISGEDKELTGNIAQEYANDKTTDTEKETKNSNADISPANSVV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g02021 557 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Vian7g02021 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 515 - -
Vian7g02021 557 MobiDBLite consensus disorder prediction 524 557 - -
Vian7g02021 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 510 IPR020846 GO:0022857
Vian7g02021 557 Gene3D MFS general substrate transporter like domains 19 533 IPR036259 -
Vian7g02021 557 Pfam Sugar (and other) transporter 27 517 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian7g02021 557 CDD MFS_PhT 24 508 - -
Vian7g02021 557 FunFam Inorganic phosphate transporter 1-6 19 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g02021 Vian-Chr7 32879485 32881158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g02021 6 519 Inorganic Solute Cotransporters AT5G43350 60.803 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g02021 K08176 - gmx:100820250 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02021 7 32879485 32881158 Vian7g02021 7 32879485 32881158 ECH