Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01993 ATGAGTGACATGGAGAGAGCAATGGAAGAAAAGAAAAGGAGGGGTTTGAGGGATTGTTTCACATCATGGCAGGTTGTATTGAGCATGATAATGGTGCAAGGTTTTGTGACAGGGATGCAGCTTCTTTCAAGGGTCATTTTGGTTCAGGGTTCCTTCATCTTTTCACTCATTGCATATCGCCATATTGTTGCTGCATTTTGTGTTGCACCTTTTGCTCTTTACTTTGAGAGAGACCGCACAGTGAGTTTTACTCCCAAAGTTTGGTTTTGGCTCTTCGTTAACGCATTGGTTGGAATGACTCTGGCTCAAGGCTTATTCTATTATGGGCTGAGAGATACTTCAGCTACTTACTCTGTTAACTTTCTCAACATGGTTCCAATATGCACATTCCTCACCTCAGTCATTTGTAGATCGGAGAAATTAGGGCTGAAAAATTGGAGTGGTAGAACTAAGTGTGCAGGGGCAATTTTGTGTGTTGGTGGAGCATTACTTACCAGTTTTTACAAAGGCAAACAATTTTATCTTTTTCATCATAGTCATCATGCTCAAACTGCTGTTGCAGCACACCCAACTCACATGCTTCGGGGTACTTTCCTTTTGATCGGCAGCTGCTTCTCATACACAGCTTGGTTTCTTCTACAAGTCCAATTGCTTAAAGTATTTCCACTTAGGTATTGGGCAACAATGCTATCATGCGTTATAGCAGCAATTCAAGCAGGAATCGTAGGGGTCTGCATAGATTCTAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTACAACTGGGAGCACTGGCTACTGCTGCTACATTCTGCATACTATCTTGGGCAATAACAATCAAAGGACCTACTTATCCTTCGATGTTCAATCCCCTCTCTCTTATTTTTGTGGCCTTTTCAGAAGCTCTCATTCTCGGACAACCACTGACCTTTGGAACGTTGTTGGGCATGGTTTTGATCATAGTTGGGTTGTACTCCTTCTTGTGGGGAAAAAGAAATGAGAAAATGGGCATCACTCAACAGCCAATCGTGGCAGCTGCAGAAGTGTCAAATATCTCTGATTTGATTGCTGGGGCAGAATCAACAGCTACAGTAGTGCCAAGTTCTTCACCGCTGAATACTCTGGATTTGGAACACGATGCTCCTCACAAAAATTGA 1155 0.4268 MSDMERAMEEKKRRGLRDCFTSWQVVLSMIMVQGFVTGMQLLSRVILVQGSFIFSLIAYRHIVAAFCVAPFALYFERDRTVSFTPKVWFWLFVNALVGMTLAQGLFYYGLRDTSATYSVNFLNMVPICTFLTSVICRSEKLGLKNWSGRTKCAGAILCVGGALLTSFYKGKQFYLFHHSHHAQTAVAAHPTHMLRGTFLLIGSCFSYTAWFLLQVQLLKVFPLRYWATMLSCVIAAIQAGIVGVCIDSSKAAWRLEWNLQLGALATAATFCILSWAITIKGPTYPSMFNPLSLIFVAFSEALILGQPLTFGTLLGMVLIIVGLYSFLWGKRNEKMGITQQPIVAAAEVSNISDLIAGAESTATVVPSSSPLNTLDLEHDAPHKN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01993 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 168 - -
Vian7g01993 384 PANTHER WAT1-RELATED PROTEIN 25 338 IPR030184 GO:0016020|GO:0022857
Vian7g01993 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
Vian7g01993 384 Pfam EamA-like transporter family 195 326 IPR000620 GO:0016020
Vian7g01993 384 Pfam EamA-like transporter family 41 165 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01993 Vian-Chr7 32397067 32400636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01993 27 330 Nodulin-like Gene Family AT1G09380 32.492 9.86e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01993 - - gmx:100808825 575.859