Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01992 ATGTTTTTATTATCTTTGGAAGATGAAGAAGGTGGCGACGGCGTTGGAGGCCCAATGTTGCGGTGGCATTTAGAGATTCAGATTCAGATGGTGTGGTTGGGCCTGGGCTGTCATTGTGGGCTTGAAGTGCAAGTTGAGAATGGACCTTCATGGATAGTAGCTCTAGGTCAAAGAGACGCAACAACAGCAAGCGAAAGCGCAGCCAACGCCCAACTCCCTTCTCTGTTCTTCGACCTTCCCACACTCACCAGCGCCTTCGCCGCCAAAGGCTTGAGCGCGTGTGACATCACCGTGCTCTCCGGCGGCCACAACATAGGCCAAGCACAGTGCCAGCTTTTTAGAGCTCGCATCTACAACGAAACCAACATCGACATCAGCTTCACCGAGTCAAGAAGAAGCATTTATCCTTCCTCCGGTGGGGACACCAACTTGTCTCCTCTAGACTCCCTCACTCCCATTCGTTTTGACAACAAATACTTCTCCGAGCTGGTGGCTGGTCGTGGCCTTCTCATCTCAGATCAAGTGCTCTTCGATGGTGGCTCTTAA 546 0.5183 MFLLSLEDEEGGDGVGGPMLRWHLEIQIQMVWLGLGCHCGLEVQVENGPSWIVALGQRDATTASESAANAQLPSLFFDLPTLTSAFAAKGLSACDITVLSGGHNIGQAQCQLFRARIYNETNIDISFTESRRSIYPSSGGDTNLSPLDSLTPIRFDNKYFSELVAGRGLLISDQVLFDGGS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01992 181 Gene3D Peroxidase, domain 2 73 179 - -
Vian7g01992 181 PRINTS Haem peroxidase superfamily signature 95 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Haem peroxidase superfamily signature 47 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Haem peroxidase superfamily signature 148 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Plant peroxidase signature 94 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Plant peroxidase signature 162 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 PRINTS Plant peroxidase signature 47 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 Pfam Peroxidase 44 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 ProSiteProfiles Plant heme peroxidase family profile. 43 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 Gene3D - 43 72 - -
Vian7g01992 181 PANTHER PEROXIDASE 72-RELATED 45 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian7g01992 181 SUPERFAMILY Heme-dependent peroxidases 44 180 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01992 Vian-Chr7 32381187 32385422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01992 48 181 Peroxidase AT5G05340 54.412 6.17e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01992 K00430 - gmx:100806309 199.519