Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01986 ATGGGTGCCGTTGTCGAGTGTTACCCGCCGCCGCGTACGGCGGTGCTGTCTCTCAATACGCTGCCGCTGGGCTTCCGTTTCCGTCCCACCGATGAAGAGCTTATTGATTACTACCTGCGCTCGAAGATCAACGGCAACGGGGACGATGTCTGGGTTATCCGTGAGATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGGAAGTATCCCAATGGGCACAGGTTGAACCGAGCTACGACACATGGGTATTGGAAAGCAACGGGGAAGGATCGAAAGATTAAGTCTGGTTCTGCTCTGATCGGAATGAAGAAGACTCTTGTTTTCTATACTGGTCGTGCACCGAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCCTGAAGGAGCTCGATGGTACCAATCCTGGACAGAATCCATACGTCCTTTGTCGGTTATTTAAGAAACATGATGAGACTCTTGAAGGTTCAAATGGTGAGGATGTGGAGCGGACTGCTTCAACCCCTATGACTGCCAATCACTCTCCAGATGAAATACAATCTGATTCATCTCTGGATCCAGCATCTTCCTCACAGATCACTGAGGGTGAAAAGCCGCTAACAGTTATCCATGAGAACTCTGAGGAAGCAATATCCAACATTATAACTGCAGTTGACTCCCATAGTGATGGATGTGATGCTCCTGATGTACAAAATCAAATTGTAAAACCAGCTGCAGAGCAGGATCAGCCATTTAACTTTGAGGATTTTTATGACCCAACAAACCAGCAATTAGATGACAAATTATTCTCCCCAGTCCATGCTCATTTCCCACCTGAAATTTACTATCAATCAGAACTTCAGTATGGTACAAATGACAATATACCCGACCTTTTTGACTCGGTTAACTGGGACGCTATCTCCTATGATACTAGCAGTCTAGAGCTAGGCTCATCCTTCCTCAATGTCAGGGACAATGGATCTGGCAGTGACTCAGATGTGGAAATGGCCAATATGACGAATCTGCAGGCATTACATGGCTATCCTAACGAGGCAGTTGAGAAGAAGAGTAACGTAGGATTATTTCAGAGCACTCCTCAGATGGCTTTCTCAAACGATGGTTATATGGGCCAGGTAGATGATCCGATCAAGAATAGTGGGCAACTAAGAGACTTTGATACGTTTGTTAATGGTGATACTGGAATCAGAATAAGGGCTCGTCAAGGACGAAACGAACAGCCAAACATGAATGGAATGGTACAATCACAAGGCAATGCACCAAGGAGAATACGATTACTTGTCGAGCGACAGTTTGCTTCCGAGAAAGCGGCGAAAGATGGAAGTTGTGCTTCAGCCCCAGAAGAGCATAATTCAAAAACCACCATTTCTAGGGAGTGGAATGCTTCGGAAAACCATGCTACCGATGAGAGTTCCGGCAGCTGTGATGATGTGGATGTTGCAACTGCAGAATCCTTCATCTCAAAAGAGAGCAGAAGGGGCCATCACAGTTCAAAGGTTTCGTCTAACCGTGGCATGTGGTCTTATGTTCTTGCAGTTTCTGCAACTGTGTTGGTTTCAGTAACAGTGATTGTTAATATATGGGCGTATTTGAGATCTTAA 1665 0.4607 MGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSALIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDETLEGSNGEDVERTASTPMTANHSPDEIQSDSSLDPASSSQITEGEKPLTVIHENSEEAISNIITAVDSHSDGCDAPDVQNQIVKPAAEQDQPFNFEDFYDPTNQQLDDKLFSPVHAHFPPEIYYQSELQYGTNDNIPDLFDSVNWDAISYDTSSLELGSSFLNVRDNGSGSDSDVEMANMTNLQALHGYPNEAVEKKSNVGLFQSTPQMAFSNDGYMGQVDDPIKNSGQLRDFDTFVNGDTGIRIRARQGRNEQPNMNGMVQSQGNAPRRIRLLVERQFASEKAAKDGSCASAPEEHNSKTTISREWNASENHATDESSGSCDDVDVATAESFISKESRRGHHSSKVSSNRGMWSYVLAVSATVLVSVTVIVNIWAYLRS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01986 554 MobiDBLite consensus disorder prediction 182 218 - -
Vian7g01986 554 MobiDBLite consensus disorder prediction 425 439 - -
Vian7g01986 554 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Vian7g01986 554 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Vian7g01986 554 MobiDBLite consensus disorder prediction 458 480 - -
Vian7g01986 554 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
Vian7g01986 554 MobiDBLite consensus disorder prediction 176 218 - -
Vian7g01986 554 FunFam Nac domain-containing protein 86 30 174 - -
Vian7g01986 554 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Vian7g01986 554 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 242 - -
Vian7g01986 554 MobiDBLite consensus disorder prediction 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01986 Vian-Chr7 32292076 32295199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01986 14 450 NAC Transcription Factor Family AT4G35580 42.094 6.06e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian7g01986 NAM 4.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01986 - - gmx:100778903 853.203