Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian7g01979 | ATGGGAGAGGGAGAGAACATAGAAGTGGAAACAGAAGCAGAATCCGAAGCATCATCGTCCTGGAACCTCGGAAAACACACTCAGATAATCGAGCTGTCGGAGAAGTTGTTGGACGGGAACCTCAGCGCCAAGATTGAGGCTGCTAGGGAGATAAGGAAGATGGTTCGGAAATCATCGCCCTCGTCGAAGATACGTGCGAAGCTCGCCGCAGCGGGTGTGATTGAACCCCTCGTGCTGATGCTGTCTTCTTCCAACATCGAAGCTCGCCAATCCTCTCTTCTCGCTCTCCTCAACCTCGCTGTTCGCAATGAACGAAACAAGGTCAAAATAGTGACAGATGGTGCCATGCCTCCACTGGTGGAGCTCCTCAAGATGAAAAATAGCGGTATACGAGAATTAGCTACAGCTGCAGTCTTGTCACTCTCAGGTGCTGCATCCAACAAGCCCATTATTGCTGCTTCTGGAGCCGCACCTTTCCTTGTTCAGATTCTCAAATCTGGAACTGTTCAAGGCAAAGTTGATGCTGTTACAGCACTCCATAATCTTTCTACCAGCAATGAGAATTCCATTGAACTTCTTGATCCAAGTGCTGTTTTCCCTCTGATCAACCTTCTCAAAGAGTGCAAGAAGTATTCCAAGTTTGCGGAAAAAGCCACATCACTGCTTGAAATCCTTTCCAACTCTGAAGAAGGGCGAACTGCAATCTCAATTGCAGATGGTGGAATCTTAACCCTAGTTGAGACAGTTGAAGACGGATCACTTGTCAGCACAGAACATGCTGTAGGAGCTCTGCTATCTTTATGCCGAAGCTGCCGGGATAAATACCGGGAACTGATTCTTAAAGAAGGAGCGATTCCGGGTCTGCTACGTCTGACCGTGGAGGGCACGGCTGAAGCTCAAGATAGAGCTCGTGTGCTTCTGGATTTGCTCAGAGATTCTCCCCCAGAAAAGAGACTAACCTCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGAGTAGATGGAGCAGATAAAGCTGCTGAAACTGCCAAACAGTTGTTGCAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGCACTCCTTCTATTCCTTCCACTTGA | 1137 | 0.4749 | MGEGENIEVETEAESEASSSWNLGKHTQIIELSEKLLDGNLSAKIEAAREIRKMVRKSSPSSKIRAKLAAAGVIEPLVLMLSSSNIEARQSSLLALLNLAVRNERNKVKIVTDGAMPPLVELLKMKNSGIRELATAAVLSLSGAASNKPIIAASGAAPFLVQILKSGTVQGKVDAVTALHNLSTSNENSIELLDPSAVFPLINLLKECKKYSKFAEKATSLLEILSNSEEGRTAISIADGGILTLVETVEDGSLVSTEHAVGALLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSPPEKRLTSSVLEKIVYDIAERVDGADKAAETAKQLLQDMVQRSMEHSMKCIQHRAASCTPSIPST | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian7g01979 | 378 | Gene3D | - | 16 | 372 | IPR011989 | - | |
Vian7g01979 | 378 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 196 | 240 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vian7g01979 | 378 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 72 | 114 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | Pfam | Armadillo/beta-catenin-like repeat | 103 | 141 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | SUPERFAMILY | ARM repeat | 34 | 335 | IPR016024 | - | |
Vian7g01979 | 378 | SMART | arm_5 | 185 | 227 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | SMART | arm_5 | 228 | 269 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | SMART | arm_5 | 144 | 184 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | SMART | arm_5 | 102 | 143 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | SMART | arm_5 | 61 | 101 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 114 | 156 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | PANTHER | U BOX DOMAIN-CONTAINING | 28 | 312 | - | - | |
Vian7g01979 | 378 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 155 | 197 | IPR000225 | GO:0005515 | |
Vian7g01979 | 378 | FunFam | U-box domain-containing protein 4 | 5 | 370 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian7g01979 | Vian-Chr7 | 32027451 | 32036624 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian7g01979 | 27 | 312 | U-box Gene Family | AT3G54790 | 38.328 | 2.90e-37 | 141 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian7g01979 | K08332 | - | gmx:100782472 | 634.795 |