Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01970 ATGGCTGCAGGAAGAAACCCCTTTCGGCCTTTTAAGTCAATTAAGCCATGTATTGAAGATCCAGATAGCAACCAAAACAGAACCGGCGATAACTCCTCCTTCTACGAACACTTCGTCCTCGCCGGAATCCGAGTTGACCGAGTTGAACCCGGTTGCGTCTCGTGCTCCTTCAAAGTCCCTTCTCGTCTCGCCGACAGGAGTGGGAAGTTGGCGAATGGAGCAATTGCGAATTTGGTGGACGAAGTTGGAGGCGCTGTCATCCATGAAGAGGGTCTCCCCATGAATGTTTCCGTCGACATGTCCATTTCTTTTCTCTCAACTGCTCGCGTTGGCGATGAACTAGAAATTACTTCTAGGTTGTTAGGAAGGAAAGGAGGTTATTCTGGGACAATTGTTCTCCTTAAAAACAAAGCCACGGGAGAATTGATAGCCGAAGAAAATATAGACAAAATAGAGGACCAAATTCTAGTGGTGCTGCCAGTCACAGACTTCGACATCGTCATCGACTCGCTGCCAACGGGGACGATCAACGACCTCCACGAGATCCCAGACGCAAACTTAGGACCACCCTCAATCCACAAACCCACAAAGAAGAACAGAAGCCAAAACCCTCAACCTGCGAATCACCAAAACGTTGTCATCCATTTGCAAAGCAGAAACATAAATCATTACCCAACGCGATGCACCACCCTAGTGGTCAACCGCGAAGGAGAAGAGGAAAGAAGTCTTTGCCACGCGGTAAAACGAGAAAAAAGAAAGGGAAGAAAGCTTCCCTGTTGCGTGAGCTCCATAAAGGTAGCCCAAAGCTGGTCTGTCGAAAGAGAAAGACCAAAAATTAGGAAAGAGGACCTGACGTTTGACGGTGTATTCGGTTCCAACGTGATGATATTCGGTTCCCTTGGAGCATTTTGTTCCAAGCTTCATGGTGGAGGTGCAGGCGCCATGTTCGACCAAGCTGGAGGTTTCTTTGGGGGTGGACGTGGATTATATGCGACGAAGGATCGGGTGCTTCCAACTGTTGAACCACATGATTCCGTCACAGTTGGTGGACTCCGCTACCGAGGATGTCGCCGGAGCGTTCTAGGTGCCGCATGCAAAGCGTGCAGTAGCGACTAG 1116 0.4937 MAAGRNPFRPFKSIKPCIEDPDSNQNRTGDNSSFYEHFVLAGIRVDRVEPGCVSCSFKVPSRLADRSGKLANGAIANLVDEVGGAVIHEEGLPMNVSVDMSISFLSTARVGDELEITSRLLGRKGGYSGTIVLLKNKATGELIAEENIDKIEDQILVVLPVTDFDIVIDSLPTGTINDLHEIPDANLGPPSIHKPTKKNRSQNPQPANHQNVVIHLQSRNINHYPTRCTTLVVNREGEEERSLCHAVKREKRKGRKLPCCVSSIKVAQSWSVERERPKIRKEDLTFDGVFGSNVMIFGSLGAFCSKLHGGGAGAMFDQAGGFFGGGRGLYATKDRVLPTVEPHDSVTVGGLRYRGCRRSVLGAACKACSSD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01970 371 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 16 146 IPR039298 GO:0047617
Vian7g01970 371 CDD PaaI_thioesterase 40 145 - -
Vian7g01970 371 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 36 145 IPR029069 -
Vian7g01970 371 MobiDBLite consensus disorder prediction 181 206 - -
Vian7g01970 371 MobiDBLite consensus disorder prediction 1 29 - -
Vian7g01970 371 Pfam Thioesterase superfamily 70 121 IPR006683 -
Vian7g01970 371 FunFam Acyl-coenzyme A thioesterase 13 22 151 - -
Vian7g01970 371 Gene3D Hotdog Thioesterase 24 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01970 154 188 EXO70 exocyst subunit family AT5G58430 57.143 1.09e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01970 K17362 - gmx:100305814 218.009