LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian7g01961	ATGCAAATGGAGACCCTCTCTCTCTTCCTCACTCTAACAGCAACTCTCTCAGCCTATTTCCTCTGGTTTCTCCTCCTCGCCCGAACCCTAACCGGTCCAACACCCTTCCCCTTCCTCGGCAGCCTCCCCCAGCTTTTCCACAACCGCCACCGTGTCCACGACTGGATCGCCGCCAACCTACGCGCTGCTGGCTCCTCCGCCACCTACCAAACGTGTATCATCCCCTTCCCCTTCTTGGCACGTAGACAAGGGTTCTACACCGTGACGTGCCACCCCAAGAACCTCGAGCACGTCCTCCGCACGCGCTTCGACAACTACCCCAAGGGCCCCAGGTGGCACGCCGCCTTCCACGACCTCCTCGGCCACGGCATCTTCAACAGCGACGGCGACACCTGGCTCATGCAGCGTAAAACCGCGGCTCTCGAGTTCACCACACGCACTCTGAAACATGCCATGTCTCGGTGGGTTAACCGCTCCATCAAGAATCGGCTGTGGTGCATCATGGACAAAGCTGAGAAAGATAGCGTCTCCGTGGACCTACAAGACCTTCTTCTGCGCTTGACCTTTGATAATATCTGCGGACTTACCTTCGGTAAAGACCCCGAAACTCTTTCCCCCGACCTTCCCGAAAACCCCTTCGCCGTTGCTTTTGACACCGCCACTGAAGCCACCATGCACAGATTCCTCTACCCGGGTATAGTGTGGAGGTTCCAGAAGCTTCTGTGCATTGGATCCGAAAAGAGGTTAAAGGAGAGCCTCCGAGTGGTGGAAACCTACATGAACGACGCCGTTGCGGATCGCAGGGAAACTCCTTCCGACGACTTGCTCTCGCGTTTCATGAAGAAGCGTGACGCAGCCGGCAAACCCTTCTCTTCCGCTGCGCTTCAACGCATCGTCCTTAACTTCGTCCTCGCGGGCAGGGACACCTCATCGGTGGCCCTCACCTGGTTCTTCTGGCTCCTCATGAAACACCCTCACGTGGAGGAAAAGCTCATGCAAGAGATCACAACGGTTCTCTCCGACACACGTGGTGGAGACCGCCGCCGGTGGACAGAGGACCCCCTTGACTTTGGTGAGGCGGATCGGCTGGTGTACCTGAAGGCCGCACTGGCGGAGACACTGCGTCTGTACCCGTCAGTGCCGCAGGACTTCAAGCAGGCCGTCGACGATGACGTTCTGCCGGACGGGACAGTGGTTCCGGCGGGGTCGACGGTGACGTACTCTATATACTCTGCTGGGAGGCTGGAGACGATTTGGGGCGAGGATTGCATGGACTTTAAACCAGAGAGGTGGCTTTCGGTTCGCGGGGATCGGTTTGAACCGCCAAAGGATGGGTTCAAGTTCGTGGCTTTCAACGCTGGACCGAGAACTTGTTTGGGCAAGGACTTAGCATACCTCCAGATGAAATCAGTGGCCGCCGCTGTGCTCTTGCGTTACCGGCTATCGCTAGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCACTCACTCTTTTCATGAAGAATGGGCTCAAGGTGTTCTTGCATCCACGTAAGCTCCAAGGTGGGCCAGGTGTTGCCACGTCGTCATAA	1569	0.5736	MQMETLSLFLTLTATLSAYFLWFLLLARTLTGPTPFPFLGSLPQLFHNRHRVHDWIAANLRAAGSSATYQTCIIPFPFLARRQGFYTVTCHPKNLEHVLRTRFDNYPKGPRWHAAFHDLLGHGIFNSDGDTWLMQRKTAALEFTTRTLKHAMSRWVNRSIKNRLWCIMDKAEKDSVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFAVAFDTATEATMHRFLYPGIVWRFQKLLCIGSEKRLKESLRVVETYMNDAVADRRETPSDDLLSRFMKKRDAAGKPFSSAALQRIVLNFVLAGRDTSSVALTWFFWLLMKHPHVEEKLMQEITTVLSDTRGGDRRRWTEDPLDFGEADRLVYLKAALAETLRLYPSVPQDFKQAVDDDVLPDGTVVPAGSTVTYSIYSAGRLETIWGEDCMDFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLKVFLHPRKLQGGPGVATSS	522

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian7g01961	522	Pfam	Cytochrome P450	32	500	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	Gene3D	Cytochrome P450	26	516	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	SUPERFAMILY	Cytochrome P450	30	510	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	FunFam	Cytochrome P450	25	513	-	-
	Vian7g01961	522	PRINTS	P450 superfamily signature	305	322	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	PRINTS	P450 superfamily signature	458	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	PRINTS	P450 superfamily signature	368	379	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	PRINTS	P450 superfamily signature	449	458	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vian7g01961	522	CDD	CYP86A	70	503	-	-
	Vian7g01961	522	PRINTS	E-class P450 group I signature	294	311	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian7g01961	Vian-Chr7	31601457	31603163	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian7g01961	3	510	Cytochrome P450	AT5G58860	73.137	0.0	786

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian7g01961	K15401		-	gmx:100788343	946.036

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