Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01945 ATGGCGGCTTCCGATGGAAGCGAATACTTCGAATTAGGGTCACTCCATAGCGAGAGCTTCGCTATGGCCTCCAACTCCGAGACCGTGGCCGAGGATGAAGAGGAGCTGCAGTGGGCGGCGCTCTCCAGGTTGCCGTCGCAGAAGCGCATCAACTACGCACTCCTCCGCGCATCTTCTTCCCGTGCTCAACCTCCTACGCAAGACTTAGTTGACGTCCGAAAGCTGAGCCGCTCTCGCCGGGAACTCGTCGTTAAGAAAGCTCTGGCCACCACCGACCAAGACAACTACCGCCTTCTCTGCGCCATAAAAGAACGCTTCGACAGCGATTCTTCAAAATTACTGATCTATGATTCGATATTGCTATTGTTCCTGTTTTTTGATTGCGGTAGGGTTGGGTTGGAGGTGCCGAAGATCGAGGTGAGATTCAGGAACCTGAACGTCTCTGCCAATGTTCAAATTGGTTCTAGAGCTCTACCAACACTGATTAACTATACTCGTGATTGCTTCGAGGGAATCCTAACTAAGATGAGGTTATGCAAACCTAAACGGCATGCCCTTACCATACTGAACAATATCAGTGGCGTTATCAAGCCAGGAAGGATGACTCTGCTATTAGGACCTCCGGGAGCAGGTAAAACCAGCTTACTTCTGGCTCTCGCGGGCAAGCTTGATAACAACCTCAAGACAACGGGTAGTATAACATACAATGGCTGCGAGGTGGACGATTTTTATGTTCGACGGACTTCTGCATACATTAGTCAAACAGATGATCACGTTGCGGAACTGACGGTAAGAGAATGTTTGGATTTTGGTGCTAGATGTCAAGGTGCAGAAGAAGGTTTTGCAGCATATACAACTGAACTTGGCCGCCTAGAGAAGGAAAGGAACATAAGACCTAGTGCAGAAGTTGACGCGTTTATGAAGGCATCATCTGTCGGAGGTAAGAAACACAGCGTGAATACGGATTACATTTTGAAAGTGCTTGGTCTCGATATATGTTCGGAGACAATAGTTGGCAACGATATGATGCGAGGGGTTTCTGGGGGCCAAAAGAAAAGAGTTACAACAGGAGAGATGATTGTTGGTCCAAGAAAAACACTATTTATGGATGAGATATCAACTGGTCTTGATAGCTCCACTACGTTCCAGATAGTAAAATGCATAAAGAACTTTGTTCATCAAATGGACGCTACAGTACTCATGGCTCTCCTTCAGCCAGCTCCTGAGACATTTGAGCTATTTGATGATCTGGTGCTTCTGTCAGAAGGGTACGTGGTATATCAAGGTCCTCGAGAAGACGTGCTCGACTTTTTTCAGTCATTAGGTTTTCAACTTCCACCTCGTAAGGGGATTGCTGACTTTCTACAGGAGGTGACATCTAAAAAGGATCAAGCACAATACTGGGCAGACCCTTCAAAACCATATGTGTTCGTCTCAGTTGCTGAAATTGCACAAGCCTTTAAAAATTCGAAATTTGGAAAGTATATGGAATCCTTGCAAAGTTATCCACTTGATACATCAAAAGGTCATCCTTCAGCTTTGGCTAGAACTAAATATGCCGTGCCAAGATGGGATCTTGCCAAAGCTTGTTTTTCTCGAGAACTCCTCTTGATAAGAAGGCATAGCTTTCTTTATATCTTTAGGACCTGCCAGGTTGCTTTTGTTGGATTTGTCACATGTACAGTATTCCTACGAACAAGGTTACATCCCACAGATGAGGTTTATGGACGCCTTTATCTTTCTGCTCTATTTTTTGGGATGGTTCACATGATGTTTAATGGATTTTCTGAGCTACCACTCTTGATAAGTCGGCTTCCAGTATTTTATAAACAAAGAGATAATTTGTTCTATCCTGCATGGGCGTGGTCTGTTACCAGTTGGGTTCTACGTGTACCCTATTCCGTTGTTGAGGCTGTTATATGGACTGTTGTTGTATATTACAGTGTTGGATTTGCTCCATCAGCAGGAAGGTTTTTTCGCTACATGCTTTTACTTTTTTTAATGCATCAAATGGCATTAGGTCTCTTCCGTATGATGGCAGCTGTTGCACGAGATATGGTTCTTGCCAACACATATGGATCAGCTTCACTACTTATTGTATTCTTACTAGGAGGATTTATTATACCTAAAGCAATGATTAAACCGTGGTGGATTTGGGGCTACTGGTTGTCCCCCCTTACCTATGGACAACGTGCTATCACAGTTAATGAATTTACTGCTACAAGATGGATGAAGAAATCCGAGAATGGGGGGAGCACAGTTGGTTACAATGTCCTAGTCTCACAGAGCCTACCAACTGCTGACTACTGGTACTGGATTGGTATTTCAGTTGTACTTGTCTATTCGCTTTTTTTCAACAACATGGTCACTGTGGCCTTGACCTTTCTGAATCCCCCACAAAAAGCACGAACAGTTATTCCAAGTGACGATGACTCGGAAAAGAAATCTTCAAGAGACGGCAGTAATCATGTCTATGAAACGAGTCCCCGCGCCAAATCTGCGAGAGAGGACAGTAATAAGAAAGGAATGATTCTTCCATTTCAACCACTGACAATGACATTCCATAATGTGAATTATTTTGTTGATATGCCAAAGGAGATAAGCAAGCAAGGAATACCTGAAACGCGGTTGCAGCTGTTGACAAACGTGAGCGGTGTTTTCTCACCCGGTGTACTTACAGCGTTAGTGGGATCAAGTGGGGCTGGAAAGACCACTTTGATGGACGTACTGGCTGGTAGGAAAACTGGAGGCTACATAGAAGGGGAGATTAAAATTTCGGGTTACCCAAAAGAGCAACGAACATTTGCCAGAGTATCAGGATATGTTGAGCAAAATGATATTCATTCTCCTCAAGTAACAATTGAGGAGTCACTATTGTTTTCTTCAGCTCTTCGCCTTCCCAAGGAAGTTGGAGTTGCTAAAAGACTTGAGTTTGTTGAACAAGTGATGAAACTAGTTGAGCTTGATGCTTTGAGAAATGCTTTGGTTGGTATGCCAGGTAGTTCTGGCTTATCAACTGAGCAGAGAAAGCGATTAACAATAGCAGTGGAGCTTGTGGCAAACCCTTCCATTATTTTTATGGATGAGCCTACTTCTGGACTTGATGCACGTGCAGCAGCTATTGTTATGCGAGCTGTTCGAAATACTGTTGATACTGGTAGAACTGTAGTTTGCACCATACATCAACCAAGTATTGATATATTTGAAGCATTTGATGATTTACTTCTTATGAAACGTGGCGGACGAGTAATATATGGGGGAAAACTGGGTGTTCAGTCACAGATAATGATTGATTACTTTCAGGGAATAAGAGGAATTCCCCCCATTCCGAATGGGTACAATCCGGCCACCTGGGTGCTTGAGGTTACTACGCCTGCTACTGAAGAGAAACTTAATATAGATTTTGCAGAAGCTTACAAGAATTCGGATCAATACAGGGGGGTGGAGTCTTCTATCTTGCAATTTGGGCATCCTCCTGCAGGATCTGAACCACTGAAATTTGATTCTATGTATTCGCTAAATCTGTTTTCCCAATTTTTACGATGCCTATGGAAGCAAAATCTTGTATACTGGAGAAGTCCATCGTATAATGCGATGAGGTTATACTTCACCACAATAAGTGCTCTGATATTTGGTACCGTATTTTGGGATGTTGGCTCAAAAAGGGAATCAACTCAAGAGCTGTTCGTGGTTATGGGAGCTATGTATTCTGCATGCATGTTTCTTGGGGTAAATAACTCTTCTTCTGTACAGCCAATTGTTTCAATAGAAAGGACTGTGTTCTATAGAGAGAAAGCTGCTGGTATGTACTCTCCAATAGCTTATGCTGCAGCCCAGGGGCTAATAGAGGTACCATACATCGCTGTTCAGACGATAGTATTCGGTATAATCACATATTTCATGATCAATTTTGAAAGGACAGCAGCAAAGTTTTTTCTCTATCTGGTGTTCATGTTCCTAACGTTCACCTACTTCACCTTTTACGGCATGATGGCCGTTGGTCTTACACCTTCCCAGCATCTAGCAGCTGTTATTTCTTCAGCATTTTACTCCCTGTGGAATCTTCTCTCAGGTTTTCTCATCCCAAAATCGCAATTGAATTCCATGCATGCTTCTACACGTACTATTCCAGAAAGAAATAGAGAAATCAATAGTATTCCCGGGTGGTGGATTTGGTTCTATTATATCTGCCCGATTGCATGGACGTTACGTGGTATTATAACGTCTCAGCTTGGTGATGTGGAAACCATTATAGTGGGACCTGGATTCCAGGGCAGCGTGAAAGAGTATTTAGCTGTTACTCTTGGATATGACTCTAAAATCAACGGATTTTCAGCAGTGGGCCTTTCCGCCATTGTGCTTATTGGATTTATCATTCTCTTCTTTGGTTCTTTCGCTGTATCAGTCAAAGTCTTGAATTTCCAAAAGAGATAA 4434 0.4314 MAASDGSEYFELGSLHSESFAMASNSETVAEDEEELQWAALSRLPSQKRINYALLRASSSRAQPPTQDLVDVRKLSRSRRELVVKKALATTDQDNYRLLCAIKERFDSDSSKLLIYDSILLLFLFFDCGRVGLEVPKIEVRFRNLNVSANVQIGSRALPTLINYTRDCFEGILTKMRLCKPKRHALTILNNISGVIKPGRMTLLLGPPGAGKTSLLLALAGKLDNNLKTTGSITYNGCEVDDFYVRRTSAYISQTDDHVAELTVRECLDFGARCQGAEEGFAAYTTELGRLEKERNIRPSAEVDAFMKASSVGGKKHSVNTDYILKVLGLDICSETIVGNDMMRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCIKNFVHQMDATVLMALLQPAPETFELFDDLVLLSEGYVVYQGPREDVLDFFQSLGFQLPPRKGIADFLQEVTSKKDQAQYWADPSKPYVFVSVAEIAQAFKNSKFGKYMESLQSYPLDTSKGHPSALARTKYAVPRWDLAKACFSRELLLIRRHSFLYIFRTCQVAFVGFVTCTVFLRTRLHPTDEVYGRLYLSALFFGMVHMMFNGFSELPLLISRLPVFYKQRDNLFYPAWAWSVTSWVLRVPYSVVEAVIWTVVVYYSVGFAPSAGRFFRYMLLLFLMHQMALGLFRMMAAVARDMVLANTYGSASLLIVFLLGGFIIPKAMIKPWWIWGYWLSPLTYGQRAITVNEFTATRWMKKSENGGSTVGYNVLVSQSLPTADYWYWIGISVVLVYSLFFNNMVTVALTFLNPPQKARTVIPSDDDSEKKSSRDGSNHVYETSPRAKSAREDSNKKGMILPFQPLTMTFHNVNYFVDMPKEISKQGIPETRLQLLTNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGEIKISGYPKEQRTFARVSGYVEQNDIHSPQVTIEESLLFSSALRLPKEVGVAKRLEFVEQVMKLVELDALRNALVGMPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDDLLLMKRGGRVIYGGKLGVQSQIMIDYFQGIRGIPPIPNGYNPATWVLEVTTPATEEKLNIDFAEAYKNSDQYRGVESSILQFGHPPAGSEPLKFDSMYSLNLFSQFLRCLWKQNLVYWRSPSYNAMRLYFTTISALIFGTVFWDVGSKRESTQELFVVMGAMYSACMFLGVNNSSSVQPIVSIERTVFYREKAAGMYSPIAYAAAQGLIEVPYIAVQTIVFGIITYFMINFERTAAKFFLYLVFMFLTFTYFTFYGMMAVGLTPSQHLAAVISSAFYSLWNLLSGFLIPKSQLNSMHASTRTIPERNREINSIPGWWIWFYYICPIAWTLRGIITSQLGDVETIIVGPGFQGSVKEYLAVTLGYDSKINGFSAVGLSAIVLIGFIILFFGSFAVSVKVLNFQKR 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01945 1477 Pfam ABC-2 type transporter 528 738 IPR013525 GO:0016020|GO:0140359
Vian7g01945 1477 Pfam ABC-2 type transporter 1178 1367 IPR013525 GO:0016020|GO:0140359
Vian7g01945 1477 FunFam ABC transporter G family member 40 866 1096 - -
Vian7g01945 1477 Pfam ABC-2 type transporter 405 455 IPR043926 GO:0140359
Vian7g01945 1477 Pfam ABC-2 type transporter 1061 1123 IPR043926 GO:0140359
Vian7g01945 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 173 447 IPR003439 GO:0005524
Vian7g01945 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 445 IPR027417 -
Vian7g01945 1477 CDD ABCG_PDR_domain2 849 1087 IPR034003 -
Vian7g01945 1477 Pfam ABC-transporter N-terminal 88 163 IPR029481 -
Vian7g01945 1477 SMART AAA_5 889 1081 IPR003593 GO:0016887
Vian7g01945 1477 SMART AAA_5 198 423 IPR003593 GO:0016887
Vian7g01945 1477 Pfam ABC transporter 189 372 IPR003439 GO:0005524
Vian7g01945 1477 MobiDBLite consensus disorder prediction 804 838 - -
Vian7g01945 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 852 1104 IPR003439 GO:0005524
Vian7g01945 1477 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 22 1477 - -
Vian7g01945 1477 Gene3D - 175 478 IPR027417 -
Vian7g01945 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 877 1088 IPR027417 -
Vian7g01945 1477 Gene3D - 865 1095 IPR027417 -
Vian7g01945 1477 FunFam ABC transporter G family member 34 176 481 - -
Vian7g01945 1477 Pfam ABC transporter 880 1032 IPR003439 GO:0005524
Vian7g01945 1477 CDD ABCG_PDR_domain1 176 429 IPR034001 -
Vian7g01945 1477 MobiDBLite consensus disorder prediction 806 821 - -
Vian7g01945 1477 Pfam Plant PDR ABC transporter associated 743 806 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01945 Vian-Chr7 31389208 31400974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01945 877 1064 Calmodulin-binding Proteins AT2G36910 26.804 7.93e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01945 K08711 - gmx:100816324 2483.37