Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01928 ATGAAGGGCGGGTGTGTGAGGCATTCTCAGTTGTCTGTCACCATGTCTCAGAATCATTCTCCAATGGATGTCCATGGTGAGAAGTGTTATGAGGGCACCAAACGTAAAAGAGAGTTCAGGAAAAAAAAGCTTCTTGTCAATGACAGAGTCGAGGTAAAAAGCGTGGAAGAGGGTTTTCTGGGTTCATGGCACCCGGGGACGGTGGTCCGTTGCGAGAAGCAGAAGCGTTATGTCCAATATGACAATATTCTAGATGATGATGAATCAAAATACCTTGTGGATGTGGTGTGTGTTTCATCTGTTTTGGATGGTCATAGTTCTTCTGATTTTAGCAATGAACATGGATTCATCAGACCTTTGCCTCCTCCGTTTGAGTTTGGGGAGAGGGACCTTCCTTTTGGTGTGTGTGTTGATGTAAATTATCAAGAAGGCTGGTGGGAAGGTGTTATATTTGATCACTGCAATGGAATGGGGGAGAGGAGCGTGCTCTTCCCAGATTTGGGTGATGAAATGAAGGTAGGAATTCATCAGTTGCGGATAACTCAGGATTGGGATGAAGCTACTGAGAATTGGGAACCACGAGGGAAGTGGGTGTTCCTTGAAGTAGTTCAGGAGTGTGAAAAGGAATCCTTGGTTGCAGTTTCAGTGAAGCAAATATGGTATGATATAAGGACCAGAAAGGATTTTGACAATGTAAAACATTGGACTTGTAATGATAAGGACTTGTGGAGAGCCCTTGTAGTGGAAGTGGTTGGTGACTACTATCTTCTCACACTAGAAGAAGTTTTCCCAGCTTTAAACCTTCCGGAGGAGTTCTTGAAAGAAACACCAGAAGTGAACTCAGTTGAACCTACTGACAACTTTCATTGTGATTCTGCACACACTAATATATTTGGTTCTGACATTGGAGTTTCAGATAGCCCTATGGAAAAAAGTGGTAACATCATTTGCTTTCAAGAGGAATGCGATAGAGATCCTTTGATGGATGGGGCATCTGAGAAGAAAATTATTTTGCAGGAGGAACCTATATCTCCTGTTCAGGAGATCATGATTGGTGCTGGTGAAATAAAGCAGGCTGCTACCTGTTGTTCAAAGAAGAGAAAACGCAGAAGGTCAGTGTCCATTAGTTGGAAACCTGTGGTACTGAGCGATGTTGAATTCTGTCCTGATGTTGTTAACCAGTATTTACTTGGATGTGGTAGCAAGACCATTAGGGAACTTTTGAAGATTAAAGTACGGAAGCATCTAGCATATCTTGGATGGAAAATTGAGTGGAGAGATAGACAACCTGGACGTGGATGCTACAGGTACAAGTCACCTGATGCACAGGACGAGAAGTTTTACGCTTCAATTGTTGAAGTCTTGACACACATTCAATTGGAGTCCAACGTGAACACTGTGCATCCCCAAATTGACCACAGTAGGATGGGTTCTGCAAATGACTCTGATATTTCACTTTTGCTTTCAGACCAACCCCCAAATGACCAGGATCTAGATGTTTGTCCTCCAAAGGAAAGTGTTGGGCATGTTGATAGTGATGATCTATCGCAAACCTTGTCCCATTTTCTTCAAAAAGAGCCTGAAGTGCATACTGCTTCACCAGCAAGTGTATCAACTGAGAATAGAAAACATAAACACACCAGGAATTCAAAGGCCATGATGCCAAAGTGCGACATGAAAGGGTCACGTACAAAATGTCTAAGATCAAGCAAAAGGGTGCTGTCTGCCCCAAGTCTGTCACACCAACGACCTCAAAATGTTGTGTCTTGGTTAATGGGTAGGGGGGTGCTGATGTCAAGATGTAAGGTCTATTACTGGGTAGAAGGAGGCAGTAACACTGATTCAGCTCAGGGGAGGATTACTTATTATGGGATTAAGTGTAGCTGTTGCCAGGAAATATATGGTATTCGGGGCTTTGTAAATCACGCTGGTGGAACTGGTGACTGCAGGCCTTCTGCCAGCATATTTTTGAAGGATGGTAGGTCACTCTTAGATTGCATGATAAAAGAAATGCACGATGATAGAACAAGGGAAGATATGAACAGACCATGCAATGATCTGATATCCCTCATGGTGACTGGTTTTGCCCATCATGTTGTTGTGCGATTTGCAGCCAAATCAAAACAGAAGAGTCTGAGAATGTTCTTTTTCTTACTTGCATTCAATGTGAACATAAATCAAATGTTGATCAATAGTGTAATGTTTATGCCATCTTTTGTCAACTCTGTAGATCACGTTGGATGCTTGAAAAATAGAGAAAAGGATGAGTCAAGAAGATATATGGAAAATTGGTTCTGTGGAAAAGAGTGTGAACAGATATATGCAGGCCTACAAAGTCTATTAGGAAAGCCACTTATTGTGGGTCCTAACAATCTAACTTGGACATTGGAGAAGTTTAACAACTCTGAGAGTTCTGCTGCTGGCAGTTCTCTGAATGACTTATTGGCAGAGAAATACAGCAAACTCAGTGTTGCACTTTCGGTGATGCATGAGTGTTTTGATCCCCTAAAGAACCCTTTCACTGGTAGAGATATCATTGATGATGTTATATTCAACTCTAGGTCTGAGCTCAATCGATTGAATTTCCAGGGTTTCTACAGTGTACTTCTGGAGCAAAATGAAGAATTGATTAGTGTAGCAACTATTAGGGTGTTTGGACAGAAAGTAGCTGAGGTACCACTTGTAGGTACCAGAATACAATATCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAGCTTGAGAAGAACCTGATGCATCTGGGAGTGGAGAGATTAGTCTTGCCTGCTGTTCCTACTGTGCTAGAAACTTGGACCAAATCTTTTGGCTTTGCACAGATGTCAAATTTTGACAGGTCACAGTTCTTGGACTGTGCTTTCCTAGATTTTCAGGAAACTGTCTTGTGCCAGAAGTTTCTGACAAGGATTCCATCTCCCCAGTCAGGTGTAACAAGAGAAACAGAACGAAAAGCACAGGATGTTTTTACTCTTAGATATAGAAATGAGTTTGACAAGTCCAGTTCAGCATCAGAAGTAGACCAAGCTGAAGAGATAGAGAGAAGTAGGATGGATGAACAAGTGCTGGAGTGTGTTTTTACTCTTCCAACTTCATAA 3114 0.4197 MKGGCVRHSQLSVTMSQNHSPMDVHGEKCYEGTKRKREFRKKKLLVNDRVEVKSVEEGFLGSWHPGTVVRCEKQKRYVQYDNILDDDESKYLVDVVCVSSVLDGHSSSDFSNEHGFIRPLPPPFEFGERDLPFGVCVDVNYQEGWWEGVIFDHCNGMGERSVLFPDLGDEMKVGIHQLRITQDWDEATENWEPRGKWVFLEVVQECEKESLVAVSVKQIWYDIRTRKDFDNVKHWTCNDKDLWRALVVEVVGDYYLLTLEEVFPALNLPEEFLKETPEVNSVEPTDNFHCDSAHTNIFGSDIGVSDSPMEKSGNIICFQEECDRDPLMDGASEKKIILQEEPISPVQEIMIGAGEIKQAATCCSKKRKRRRSVSISWKPVVLSDVEFCPDVVNQYLLGCGSKTIRELLKIKVRKHLAYLGWKIEWRDRQPGRGCYRYKSPDAQDEKFYASIVEVLTHIQLESNVNTVHPQIDHSRMGSANDSDISLLLSDQPPNDQDLDVCPPKESVGHVDSDDLSQTLSHFLQKEPEVHTASPASVSTENRKHKHTRNSKAMMPKCDMKGSRTKCLRSSKRVLSAPSLSHQRPQNVVSWLMGRGVLMSRCKVYYWVEGGSNTDSAQGRITYYGIKCSCCQEIYGIRGFVNHAGGTGDCRPSASIFLKDGRSLLDCMIKEMHDDRTREDMNRPCNDLISLMVTGFAHHVVVRFAAKSKQKSLRMFFFLLAFNVNINQMLINSVMFMPSFVNSVDHVGCLKNREKDESRRYMENWFCGKECEQIYAGLQSLLGKPLIVGPNNLTWTLEKFNNSESSAAGSSLNDLLAEKYSKLSVALSVMHECFDPLKNPFTGRDIIDDVIFNSRSELNRLNFQGFYSVLLEQNEELISVATIRVFGQKVAEVPLVGTRIQYRRLGMCRILMNELEKNLMHLGVERLVLPAVPTVLETWTKSFGFAQMSNFDRSQFLDCAFLDFQETVLCQKFLTRIPSPQSGVTRETERKAQDVFTLRYRNEFDKSSSASEVDQAEEIERSRMDEQVLECVFTLPTS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01928 1037 Gene3D - 848 958 - -
Vian7g01928 1037 MobiDBLite consensus disorder prediction 471 492 - -
Vian7g01928 1037 MobiDBLite consensus disorder prediction 471 512 - -
Vian7g01928 1037 SMART agenet_At_2 129 186 IPR014002 -
Vian7g01928 1037 SMART agenet_At_2 42 110 IPR014002 -
Vian7g01928 1037 MobiDBLite consensus disorder prediction 1 27 - -
Vian7g01928 1037 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 863 951 IPR016181 -
Vian7g01928 1037 Pfam Tify domain binding domain 618 668 IPR032308 -
Vian7g01928 1037 Pfam Agenet domain 47 122 IPR008395 -
Vian7g01928 1037 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 812 974 IPR000182 GO:0016747
Vian7g01928 1037 MobiDBLite consensus disorder prediction 525 557 - -
Vian7g01928 1037 CDD NAT_SF 867 928 - -
Vian7g01928 1037 PANTHER PHD FINGER PROTEIN 12 745 1022 IPR042163 GO:0003714|GO:0045892
Vian7g01928 1037 CDD Tudor_Agenet_AtDUF_rpt1_3 46 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01928 Vian-Chr7 30941800 30947093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01928 762 916 PHD Transcription Factor Family AT5G58610 52.903 5.29e-44 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01928 7 30941800 30947093 Vian7g01928 7 30941800 30947093 ECH
Vian6g00624 6 22792108 22809777 Vian7g01928 7 30941800 30947093 PCT