Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian7g01923 | ATGCTTAGTGTGATGTTTGCATGGGAATTCACGTACAAACGTCAATTACACAACTTTAGAGTTCCAACTCAAACAGACGGGGAAAAATTAAATTATGACTTCTTGGCTGAGAGGCAGGGCGCGTTTGGAGTTGTCAACGCGGCGGTTTCCAGAGCTGATGGTCGGGTATTCGCGGTGAAGTCCGTCGACCGTGGATTGGGGCACCCTCGTCGGCTGGAGGCGTTGGAGAACGAGATTGAGATTTTGAAACGCGTGGCGTCGCCACACGTGGTCGCTTATCTCGGCGACGACGTCACGTTCGAGCACGGCGGAACGGCATCGTTCAGGAACCTTCATCTTGAGTTCATGCCAGGTGGCACCGTCGCTGATCTGGACCGCGCTGACGTGGACGAGAGTTTGGTGAGGCGCTACGCGTGGTGCCTAGTGAGCGCACTGCGTGACGTCCACGCGCGCGGCTTCGTTCACTGCGACGTCAAGGGGAGGAACGTGCTCCTCTCCGGCAACCGTTCGGAAGCGAAACTCGCCGACTTCGGCTCGGCAGTGGAAGTCGAAGTCCCGCAGGATTTGTTGCCCCGCGGGAGTCCGATGTGGATGGCGCCGGAGGTGGTGCTCCGGGAGCGGCAGGGGCCGGAGTCAGATATGTGGTCGCTGGGTTGCACGGTGATCGAGATTGTCAACGGGAAACCGCCGTGGGAGGATCACGGTGTGGACACGCTGAGTCGAATCGGTTACTCGGACGAATTGCCGGAGTTTCCAAGCAAACTGTCAGAGCTAGGGAAGGATTTTCTAGAGAAGTGTCTGAGAAGAGAATGGAGAGAGCGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGCTTCCCTACGCCGTAGTTGAATCGTCGCCTCGTTGCGTTCTGGACTGGGTTGACTCGGAGTTCGCGGAGTCAGAACATAACGACCTTGAAGAAGAAGGAGGGTGGTTAGAATTTAACCGTAATGAAAATTCAGTTAAAAGTAGAATTCGTAAATTAGCAACAGAATCGAGGGTAAATTGGGAAACACAGGGTTGGGAAGCGGTGAGGGAAGTTGAGCTGAAGGAAGAATCATGGTCATCGAGAACAACAGGTGAAACCGAAGAAGGGGTTAATTGGGAATTTAGCAATGTGGTGGGAGTAGGGAGTTGTGGGGAATGTTGGAACTGTGAAGGGGTAAATCGGGAAATAGAAGAGTTTGATATTCGTGGACCCATTCACAAGCCAAATGACAAGGGATTTAGAGTACCTTTTGCCTGTGTTATTATGGACACCAACACCAAGATGAAAACTCTAAGATGGAAATTGCCAGAGTTTCGTAAACGTTTTATGAAACAATGCTTGGAAGGTGTAGTGAATCAAAGTGATGGACCTTCGACATCTGGGCTTGTTCGACAACTGGAAAGATTTGAGCTGAAACTGAATGGTGCTGCGGACAATGAGGCTGAGTACTGTCATTGGTTATCTAAAAAGACAAAGGAACTATTTTCACAACCACCAATGAATGCTGAATCCAAACCTTGTCTCTCAAACTCTAATGCCTCAGGGGAAGTCTTCCCATCTCAAGAAACTGGAAAATCTGCAAATACGGATTGGAAGGAGCAGGTTTACCAAGAGATTCAAAAGATGAATAGTGCCTATTTTTCAAAAGTTTATGTCTCTTATCTAGAGATGAATAAGGCGCTTCAACAGCTTGCGTCTTTTCCTCAAGGATCAAATACAAATCTTTTGGAAAAACTGATAAAGAAAATGAAACAAACAGGATGTATTTTGGAACTCTTCAAATTGAAGAAATGCCAAATAACCATCGATACCAAGAAGATTCTAGATGAAGCAGAAAAGTTTGTAGAATCTAATTTTTCCCCAAAGAATGTTTCTTCCCATCATCAAGGTCCATCACATTCTAGTATTTCTCCATTGAAAATAATTGAAACGAAACCATCACAACAAGCATGGGGAACACAGAACTACTATATAAGGAAGGATGTTTCTGGGGAAAACAAGCCCTGCTTAAAAGAGAAGCAAGTGAAAATAATGGAAACGAAACCATCAACTCAAGTATTGGGAACACAGAATTTTCATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGCGAAAATAATAGAAACGAAATCATCAGCTCAAGTATTGGGAGCACAGAATTTTTATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGAAAAAATAATAGAAACGAATCCACCAACTCAAGTATTGGAAACACAGAATTTTCAAATATGGAAGGATGTTTCTCAGCAAATCAAGCCGCAGCAAGAGAAAATAATAGAAACGAAAACATCAACTCAAGTATTGGGAACACAGAATTCTCATATATGGAAGGATGTTTCTCAGCAAATCAAGCCGCAGCAAGCGAAAATAATAGAAACGAATCCATTACCCCAACCATTGGGAACACAAAATTCCTGTATATGGAAGGATGTCTCTCATCAAAACAAGCCATGCTTAAAGGAGCAGCAATTAAAAATAGTAGAAGCGAAACCATCAACACAACAATTGGGACCACAGAACTCTAGTATATTGAACCTTGTTTCTCAGCAAAACAAGCCATGCTTAAAAGAGCAGCAAGTGGAAAAACAATATAGCAATTTCCCACAGCATGTAGATCAAGTGTCTATCATGAAAGGTCCTGACAATGCCGTACAGAAGCAAGCCCAAGGTTCAGAGAAAGCAAGTGAAGCATTGAGGGTCAGTGTAAACAGTCTGGAGACTTCAGCTTCACCCTTGACAGAAAACTGCAATAAGCTTAAAGAATTTTCTGATAAATCTACGCTGAATTTTGATGAGCCAAGTGATGAAGTGAAGCGCATTCTTAAAGTGTTAGCCGTCATATCACCTGAAGCATTGAGCGCATCAGTTAATGAAATGAGAGACGCAGTCTATTTGAATGATGTGATGGCAACTTCAGAGTTCTTAGATGAACCACGAGAGATGGTTCAACAACAAAACCAACCGGACCTCATTGCACAAACTGGGAAAAGTGAGGCATTTTCACAAGCTGAAGAATTAAAGGAGATCAACCATCGATTGGTAGACAGTGTGATTGTTGTTGGAGAAAATGTCAGCTTTCTTAAAGCGCCGGGAGTAGCGGCTGAGGATAGTGAAGGGTTGGTTATCGAATTCCTTTTCAATGCAGTATCGTTCAATATGAACGTAGAATCTCATATTTTTGCAGATAAAAAGTCAATAATCAAACCATTAAGGTTGTTCGTTCCTACAAATTATCCAACTTCTTTGCCTGTTATTGTAGACAAAGAGCTGTCAGAAGTCAGTACTGAATGCCAGAAAGACCTATCAACAATAGCAAAATCAAAGCTTATTCGCTTTCTGAGATGCTTGGATCGGACATGGTCACTTGAGGATATAGCAATGTCATGGGAACGTTGTGCCAGAGAAACAGTTCTTGAGTGTGCAAAAACCTTTGGAGGAGAAACTTTTACCTCAATATATGGAGAGTGGGAAAATTATCAAACTGAAGTCATGTCTTGA | 3561 | 0.4398 | MLSVMFAWEFTYKRQLHNFRVPTQTDGEKLNYDFLAERQGAFGVVNAAVSRADGRVFAVKSVDRGLGHPRRLEALENEIEILKRVASPHVVAYLGDDVTFEHGGTASFRNLHLEFMPGGTVADLDRADVDESLVRRYAWCLVSALRDVHARGFVHCDVKGRNVLLSGNRSEAKLADFGSAVEVEVPQDLLPRGSPMWMAPEVVLRERQGPESDMWSLGCTVIEIVNGKPPWEDHGVDTLSRIGYSDELPEFPSKLSELGKDFLEKCLRREWRERWSCDQLLQHPFLLPYAVVESSPRCVLDWVDSEFAESEHNDLEEEGGWLEFNRNENSVKSRIRKLATESRVNWETQGWEAVREVELKEESWSSRTTGETEEGVNWEFSNVVGVGSCGECWNCEGVNREIEEFDIRGPIHKPNDKGFRVPFACVIMDTNTKMKTLRWKLPEFRKRFMKQCLEGVVNQSDGPSTSGLVRQLERFELKLNGAADNEAEYCHWLSKKTKELFSQPPMNAESKPCLSNSNASGEVFPSQETGKSANTDWKEQVYQEIQKMNSAYFSKVYVSYLEMNKALQQLASFPQGSNTNLLEKLIKKMKQTGCILELFKLKKCQITIDTKKILDEAEKFVESNFSPKNVSSHHQGPSHSSISPLKIIETKPSQQAWGTQNYYIRKDVSGENKPCLKEKQVKIMETKPSTQVLGTQNFHIWKDVSQQTKPQQAKIIETKSSAQVLGAQNFYIWKDVSQQTKPQQEKIIETNPPTQVLETQNFQIWKDVSQQIKPQQEKIIETKTSTQVLGTQNSHIWKDVSQQIKPQQAKIIETNPLPQPLGTQNSCIWKDVSHQNKPCLKEQQLKIVEAKPSTQQLGPQNSSILNLVSQQNKPCLKEQQVEKQYSNFPQHVDQVSIMKGPDNAVQKQAQGSEKASEALRVSVNSLETSASPLTENCNKLKEFSDKSTLNFDEPSDEVKRILKVLAVISPEALSASVNEMRDAVYLNDVMATSEFLDEPREMVQQQNQPDLIAQTGKSEAFSQAEELKEINHRLVDSVIVVGENVSFLKAPGVAAEDSEGLVIEFLFNAVSFNMNVESHIFADKKSIIKPLRLFVPTNYPTSLPVIVDKELSEVSTECQKDLSTIAKSKLIRFLRCLDRTWSLEDIAMSWERCARETVLECAKTFGGETFTSIYGEWENYQTEVMS | 1186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian7g01923 | 1186 | Pfam | Protein kinase domain | 39 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian7g01923 | 1186 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 39 | 370 | - | - | |
Vian7g01923 | 1186 | ProSiteProfiles | Protein kinase domain profile. | 31 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian7g01923 | 1186 | Gene3D | Transferase(Phosphotransferase) domain 1 | 38 | 355 | - | - | |
Vian7g01923 | 1186 | FunFam | Serine threonine protein kinase putative | 37 | 339 | - | - | |
Vian7g01923 | 1186 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 153 | 165 | IPR008271 | GO:0004672|GO:0006468 | |
Vian7g01923 | 1186 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 309 | IPR011009 | - | |
Vian7g01923 | 1186 | CDD | STKc_MAPKKK | 39 | 286 | - | - | |
Vian7g01923 | 1186 | SMART | serkin_6 | 32 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian7g01923 | Vian-Chr7 | 30765603 | 30786091 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian7g01923 | 39 | 372 | MAP Kinase Kinase Kinase | AT1G07150 | 55.263 | 1.25e-112 | 358 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Vian7g01923 | Pkinase | 1.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian7g01923 | - | - | var:108336702 | 1502.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian7g01923 | 7 | 30765603 | 30786091 | Vian7g01923 | 7 | 30765603 | 30786091 | ECH | |
Vian6g00629 | 6 | 22918529 | 22920104 | Vian7g01923 | 7 | 30765603 | 30786091 | PCT |