Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01923 ATGCTTAGTGTGATGTTTGCATGGGAATTCACGTACAAACGTCAATTACACAACTTTAGAGTTCCAACTCAAACAGACGGGGAAAAATTAAATTATGACTTCTTGGCTGAGAGGCAGGGCGCGTTTGGAGTTGTCAACGCGGCGGTTTCCAGAGCTGATGGTCGGGTATTCGCGGTGAAGTCCGTCGACCGTGGATTGGGGCACCCTCGTCGGCTGGAGGCGTTGGAGAACGAGATTGAGATTTTGAAACGCGTGGCGTCGCCACACGTGGTCGCTTATCTCGGCGACGACGTCACGTTCGAGCACGGCGGAACGGCATCGTTCAGGAACCTTCATCTTGAGTTCATGCCAGGTGGCACCGTCGCTGATCTGGACCGCGCTGACGTGGACGAGAGTTTGGTGAGGCGCTACGCGTGGTGCCTAGTGAGCGCACTGCGTGACGTCCACGCGCGCGGCTTCGTTCACTGCGACGTCAAGGGGAGGAACGTGCTCCTCTCCGGCAACCGTTCGGAAGCGAAACTCGCCGACTTCGGCTCGGCAGTGGAAGTCGAAGTCCCGCAGGATTTGTTGCCCCGCGGGAGTCCGATGTGGATGGCGCCGGAGGTGGTGCTCCGGGAGCGGCAGGGGCCGGAGTCAGATATGTGGTCGCTGGGTTGCACGGTGATCGAGATTGTCAACGGGAAACCGCCGTGGGAGGATCACGGTGTGGACACGCTGAGTCGAATCGGTTACTCGGACGAATTGCCGGAGTTTCCAAGCAAACTGTCAGAGCTAGGGAAGGATTTTCTAGAGAAGTGTCTGAGAAGAGAATGGAGAGAGCGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGCTTCCCTACGCCGTAGTTGAATCGTCGCCTCGTTGCGTTCTGGACTGGGTTGACTCGGAGTTCGCGGAGTCAGAACATAACGACCTTGAAGAAGAAGGAGGGTGGTTAGAATTTAACCGTAATGAAAATTCAGTTAAAAGTAGAATTCGTAAATTAGCAACAGAATCGAGGGTAAATTGGGAAACACAGGGTTGGGAAGCGGTGAGGGAAGTTGAGCTGAAGGAAGAATCATGGTCATCGAGAACAACAGGTGAAACCGAAGAAGGGGTTAATTGGGAATTTAGCAATGTGGTGGGAGTAGGGAGTTGTGGGGAATGTTGGAACTGTGAAGGGGTAAATCGGGAAATAGAAGAGTTTGATATTCGTGGACCCATTCACAAGCCAAATGACAAGGGATTTAGAGTACCTTTTGCCTGTGTTATTATGGACACCAACACCAAGATGAAAACTCTAAGATGGAAATTGCCAGAGTTTCGTAAACGTTTTATGAAACAATGCTTGGAAGGTGTAGTGAATCAAAGTGATGGACCTTCGACATCTGGGCTTGTTCGACAACTGGAAAGATTTGAGCTGAAACTGAATGGTGCTGCGGACAATGAGGCTGAGTACTGTCATTGGTTATCTAAAAAGACAAAGGAACTATTTTCACAACCACCAATGAATGCTGAATCCAAACCTTGTCTCTCAAACTCTAATGCCTCAGGGGAAGTCTTCCCATCTCAAGAAACTGGAAAATCTGCAAATACGGATTGGAAGGAGCAGGTTTACCAAGAGATTCAAAAGATGAATAGTGCCTATTTTTCAAAAGTTTATGTCTCTTATCTAGAGATGAATAAGGCGCTTCAACAGCTTGCGTCTTTTCCTCAAGGATCAAATACAAATCTTTTGGAAAAACTGATAAAGAAAATGAAACAAACAGGATGTATTTTGGAACTCTTCAAATTGAAGAAATGCCAAATAACCATCGATACCAAGAAGATTCTAGATGAAGCAGAAAAGTTTGTAGAATCTAATTTTTCCCCAAAGAATGTTTCTTCCCATCATCAAGGTCCATCACATTCTAGTATTTCTCCATTGAAAATAATTGAAACGAAACCATCACAACAAGCATGGGGAACACAGAACTACTATATAAGGAAGGATGTTTCTGGGGAAAACAAGCCCTGCTTAAAAGAGAAGCAAGTGAAAATAATGGAAACGAAACCATCAACTCAAGTATTGGGAACACAGAATTTTCATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGCGAAAATAATAGAAACGAAATCATCAGCTCAAGTATTGGGAGCACAGAATTTTTATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGAAAAAATAATAGAAACGAATCCACCAACTCAAGTATTGGAAACACAGAATTTTCAAATATGGAAGGATGTTTCTCAGCAAATCAAGCCGCAGCAAGAGAAAATAATAGAAACGAAAACATCAACTCAAGTATTGGGAACACAGAATTCTCATATATGGAAGGATGTTTCTCAGCAAATCAAGCCGCAGCAAGCGAAAATAATAGAAACGAATCCATTACCCCAACCATTGGGAACACAAAATTCCTGTATATGGAAGGATGTCTCTCATCAAAACAAGCCATGCTTAAAGGAGCAGCAATTAAAAATAGTAGAAGCGAAACCATCAACACAACAATTGGGACCACAGAACTCTAGTATATTGAACCTTGTTTCTCAGCAAAACAAGCCATGCTTAAAAGAGCAGCAAGTGGAAAAACAATATAGCAATTTCCCACAGCATGTAGATCAAGTGTCTATCATGAAAGGTCCTGACAATGCCGTACAGAAGCAAGCCCAAGGTTCAGAGAAAGCAAGTGAAGCATTGAGGGTCAGTGTAAACAGTCTGGAGACTTCAGCTTCACCCTTGACAGAAAACTGCAATAAGCTTAAAGAATTTTCTGATAAATCTACGCTGAATTTTGATGAGCCAAGTGATGAAGTGAAGCGCATTCTTAAAGTGTTAGCCGTCATATCACCTGAAGCATTGAGCGCATCAGTTAATGAAATGAGAGACGCAGTCTATTTGAATGATGTGATGGCAACTTCAGAGTTCTTAGATGAACCACGAGAGATGGTTCAACAACAAAACCAACCGGACCTCATTGCACAAACTGGGAAAAGTGAGGCATTTTCACAAGCTGAAGAATTAAAGGAGATCAACCATCGATTGGTAGACAGTGTGATTGTTGTTGGAGAAAATGTCAGCTTTCTTAAAGCGCCGGGAGTAGCGGCTGAGGATAGTGAAGGGTTGGTTATCGAATTCCTTTTCAATGCAGTATCGTTCAATATGAACGTAGAATCTCATATTTTTGCAGATAAAAAGTCAATAATCAAACCATTAAGGTTGTTCGTTCCTACAAATTATCCAACTTCTTTGCCTGTTATTGTAGACAAAGAGCTGTCAGAAGTCAGTACTGAATGCCAGAAAGACCTATCAACAATAGCAAAATCAAAGCTTATTCGCTTTCTGAGATGCTTGGATCGGACATGGTCACTTGAGGATATAGCAATGTCATGGGAACGTTGTGCCAGAGAAACAGTTCTTGAGTGTGCAAAAACCTTTGGAGGAGAAACTTTTACCTCAATATATGGAGAGTGGGAAAATTATCAAACTGAAGTCATGTCTTGA 3561 0.4398 MLSVMFAWEFTYKRQLHNFRVPTQTDGEKLNYDFLAERQGAFGVVNAAVSRADGRVFAVKSVDRGLGHPRRLEALENEIEILKRVASPHVVAYLGDDVTFEHGGTASFRNLHLEFMPGGTVADLDRADVDESLVRRYAWCLVSALRDVHARGFVHCDVKGRNVLLSGNRSEAKLADFGSAVEVEVPQDLLPRGSPMWMAPEVVLRERQGPESDMWSLGCTVIEIVNGKPPWEDHGVDTLSRIGYSDELPEFPSKLSELGKDFLEKCLRREWRERWSCDQLLQHPFLLPYAVVESSPRCVLDWVDSEFAESEHNDLEEEGGWLEFNRNENSVKSRIRKLATESRVNWETQGWEAVREVELKEESWSSRTTGETEEGVNWEFSNVVGVGSCGECWNCEGVNREIEEFDIRGPIHKPNDKGFRVPFACVIMDTNTKMKTLRWKLPEFRKRFMKQCLEGVVNQSDGPSTSGLVRQLERFELKLNGAADNEAEYCHWLSKKTKELFSQPPMNAESKPCLSNSNASGEVFPSQETGKSANTDWKEQVYQEIQKMNSAYFSKVYVSYLEMNKALQQLASFPQGSNTNLLEKLIKKMKQTGCILELFKLKKCQITIDTKKILDEAEKFVESNFSPKNVSSHHQGPSHSSISPLKIIETKPSQQAWGTQNYYIRKDVSGENKPCLKEKQVKIMETKPSTQVLGTQNFHIWKDVSQQTKPQQAKIIETKSSAQVLGAQNFYIWKDVSQQTKPQQEKIIETNPPTQVLETQNFQIWKDVSQQIKPQQEKIIETKTSTQVLGTQNSHIWKDVSQQIKPQQAKIIETNPLPQPLGTQNSCIWKDVSHQNKPCLKEQQLKIVEAKPSTQQLGPQNSSILNLVSQQNKPCLKEQQVEKQYSNFPQHVDQVSIMKGPDNAVQKQAQGSEKASEALRVSVNSLETSASPLTENCNKLKEFSDKSTLNFDEPSDEVKRILKVLAVISPEALSASVNEMRDAVYLNDVMATSEFLDEPREMVQQQNQPDLIAQTGKSEAFSQAEELKEINHRLVDSVIVVGENVSFLKAPGVAAEDSEGLVIEFLFNAVSFNMNVESHIFADKKSIIKPLRLFVPTNYPTSLPVIVDKELSEVSTECQKDLSTIAKSKLIRFLRCLDRTWSLEDIAMSWERCARETVLECAKTFGGETFTSIYGEWENYQTEVMS 1186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01923 1186 Pfam Protein kinase domain 39 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01923 1186 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 39 370 - -
Vian7g01923 1186 ProSiteProfiles Protein kinase domain profile. 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01923 1186 Gene3D Transferase(Phosphotransferase) domain 1 38 355 - -
Vian7g01923 1186 FunFam Serine threonine protein kinase putative 37 339 - -
Vian7g01923 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Vian7g01923 1186 SUPERFAMILY Protein kinase-like (PK-like) 39 309 IPR011009 -
Vian7g01923 1186 CDD STKc_MAPKKK 39 286 - -
Vian7g01923 1186 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian7g01923 Vian-Chr7 30765603 30786091 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01923 39 372 MAP Kinase Kinase Kinase AT1G07150 55.263 1.25e-112 358
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vian7g01923 Pkinase 1.4e-48 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01923 - - var:108336702 1502.65
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01923 7 30765603 30786091 Vian7g01923 7 30765603 30786091 ECH
Vian6g00629 6 22918529 22920104 Vian7g01923 7 30765603 30786091 PCT