Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01913 ATGGCGTCGTCGGCGTGTGTCACGGACTTGGCTCGAACGACGGCGTGCAGGGACGGTGCGGCGGCGGCGCATCTCAAAGTGGTGTCAATTTTCGTTATCTTCGTGACGAGCGTGGTGGGGATGTCGTCGCCGGTACTCCTAGCCGGGATCTTCCGCGGGAAGCCGCTCTACGACAAGGCCATAGTCGTGATCAAGTGTTTCGCGGCGGGGGTGATTCTCTCGACCTCGCTGGTCCACGTGCTCCCAGACGCGTACGCCGCACTCGCCGACTGCCAGGTGGCGTCGCGCCACCCGTGGAAGGACTTCCCTTTTGCGGGGCTCGTGACGCTTGTGGGCGCTCTTCTGGCGCTCCTGGTGGACCTCGCGGCGAGCTCGCACGTGGAGCACGCGCAGTACGCGCCGGTGGTGGCGCAGGAGAAGGAGTTGGAGCTCGGCGGAGGCTGCCATGGGTCCGGCGGCGATGGTGAAAGAGGTGAAGAATTGGTGAAACTGAAACAGAGGTTGGTTTCGCAGGTGCTTGAGATTGGGATTATTTTTCACTCTGTGATAATCGGAGTTACCATGGGAATGTCTCAGAACGTTTGCACTATTCGACCTCTCGTAGCTGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGATGCGTCGCTCAGGCTGGATTTAGCTTTGGAACAACTGCGTACATGTGTTTGATGTTTGCAGTGACAACACCCATGGGGATAATGTTGGGGATAACATTGTTCTCACTGACAGGTTACGATGATAGCAATCCAAATGCTTTAATTCTGGAAGGGCTACTGGGTTCAGTTTCATCTGGAATACTAATTTACATGGCCTTGGTTGATCTTATAGCAGTTGACTTTTTTCATAACAAGCTTATGAACTCTACTACTTGGTTGAAGAAAATATCTTTTGTTGCTTTGACTCTTGGTTCTGCTGCAATGTCTATCCTTGCCCTATGGGCTTGA 978 0.5348 MASSACVTDLARTTACRDGAAAAHLKVVSIFVIFVTSVVGMSSPVLLAGIFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCQVASRHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAQEKELELGGGCHGSGGDGERGEELVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTTAYMCLMFAVTTPMGIMLGITLFSLTGYDDSNPNALILEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSTTWLKKISFVALTLGSAAMSILALWA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01913 325 Pfam ZIP Zinc transporter 148 322 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian7g01913 325 Pfam ZIP Zinc transporter 24 129 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vian7g01913 325 NCBIfam ZIP zinc/iron transport family 13 325 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vian7g01913 325 PANTHER ZINC/IRON TRANSPORTER 22 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01913 Vian-Chr7 30413785 30415800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01913 1 325 Inorganic Solute Cotransporters AT2G30080 68.328 2.71e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01913 K14709 - gmx:100797310 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01913 7 30413785 30415800 Vian7g01913 7 30413785 30415800 ECH
Vian6g00636 6 23001913 23003305 Vian7g01913 7 30413785 30415800 ECH
Vian6g00636 6 23001913 23003305 Vian7g01913 7 30413785 30415800 PCT