Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01908 ATGACATCAGCGACAGGGGTCAACGGAGACTGTTGGTTCAATATGGGTAGGGTGGTGGACTGTTGCTCTTTCGTTTCACACAAGTGGACTGCTGCTCTTTCGTTTCACATGGGTGTTGCACTACCACTCTTTGTAACTTCTTCCATGACTGAAGCGAAAGTAGTGGACTGTTTGGAGAGGTGCATTGACACAGTGAGGAGGAGTGTAGATCTAGCGGTGGATCTGGTTTTTCATCTTCATCCCAAAGCCGCGAAGGCCAAAACGGATGTGAGATATCCGTTTGGCCTTCAACGGGTGTCCGACATCCGTCGACGGATGTCATCCTTCAGCGGATCCAAAAAGAATAAGGTAGTAGTAGAAGAAGAAGAAGATCGAGTTATAAGAAGGCAGTGTCAGCGCGAGCATGGTGTAGCAAATGATGGATTGTTCCTGAGTAGCCATTCTTTTCTAGTGGATGAATCCAGTTTGACAGGTGAGAGCGATCATGTAGAAATTGAGCCTTCAAGAAGCCCCTTCTTGTTATCTAGTGTAAAACTGGTCGATGGATATGCTCAGATGCTAGTGAAATCTGAACCAACACAACATTGGGTGAAATGA 597 0.4623 MTSATGVNGDCWFNMGRVVDCCSFVSHKWTAALSFHMGVALPLFVTSSMTEAKVVDCLERCIDTVRRSVDLAVDLVFHLHPKAAKAKTDVRYPFGLQRVSDIRRRMSSFSGSKKNKVVVEEEEDRVIRRQCQREHGVANDGLFLSSHSFLVDESSLTGESDHVEIEPSRSPFLLSSVKLVDGYAQMLVKSEPTQHWVK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01908 198 Gene3D - 117 190 - -
Vian7g01908 198 SUPERFAMILY Calcium ATPase, transduction domain A 137 189 IPR008250 -
Vian7g01908 198 PANTHER CATION TRANSPORTING ATPASE 137 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01908 Vian-Chr7 30315052 30319181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01908 137 190 Primary Pumps ATPases AT3G63380 61.111 1.15e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01908 K01537 - gmx:100806797 84.7297