Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01904 ATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCATGACCTAAAACCCTCCATTGCCCATAGAAACCTGCAATCTTCATTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGACCTTAGCTTATGGAATGACATGTGTGCTGCAAATAATGGGTCTGCAACCACACAACTCCTGGAAACATCATCAGCAGATGCCAAGGACAATGTTTACAGCTTCGGAATAATATTGTTTGAGTTGATTACGGGGAAAATCCCCATTGCCGGGAACAATGATCTTCTTGCAGATTGGGCAGCAGAATATTTAAGGTGGGGGAAATCCTTGAGAGATGTTGTGGATCCAAGACTGAACTCTTTGCAGGAAGAAGAGATTGAAGAATGGTCTGAAGTGATGAGAAACTGTGTACAACCAGATCGAGAGAAAAGGCCAACTATGAAAGAAGTTACATCTAGACTCAAGGAAATAACAGCTATGGGGCCTGATGGAGCAAACCCAAAGGCATCACCACTTTGGTGGGCAGAAATGGCAATTACGTCCACTGATTCAAGTTGA 570 0.4228 MRMRIAMGIAYCLEYMHDLKPSIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCAANNGSATTQLLETSSADAKDNVYSFGIILFELITGKIPIAGNNDLLADWAAEYLRWGKSLRDVVDPRLNSLQEEEIEEWSEVMRNCVQPDREKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01904 189 Gene3D Transferase(Phosphotransferase) domain 1 1 167 - -
Vian7g01904 189 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01904 189 Pfam Protein tyrosine and serine/threonine kinase 3 158 IPR001245 GO:0004672|GO:0006468
Vian7g01904 189 PANTHER PROTEIN MALE DISCOVERER 2 1 186 - -
Vian7g01904 189 SUPERFAMILY Protein kinase-like (PK-like) 2 162 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01904 Vian-Chr7 30276543 30277112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01904 1 162 Receptor kinase-like Gene Family AT2G28250 36.757 1.22e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Vian7g01904 PK_Tyr_Ser-Thr 6.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01904 - - gmx:100809790 355.14