Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01901 ATGGCTGCAGCTTTAGAGTGCTGGTCCAGCCGCGCCACCGCCGCCGCCGACGATGACACGGTGGAGCAGGTTCTCATGCGTACCCATCACAGATCTGAAGGCCCGGCTTCCACCCCTAAAGACCCCTCCTCCATCCCCAACGTCCACAAGAAGTTCCAGAAGCTCACCCGCAACGTCTCCGAAGCCATAGCCTCATTCAGAAATTCGCTAAACCTCGATTCACCTCCTTCCTCCAAAGCTGATGCCTCTTCGCGGAAACTTGCCTGGGGAAGTGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAACTCCCCGAGAAACTTATGTCCAACATTCGCAAGCATTATGATTCCTTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGACCGACCAGCTTGCGATTTTGATTCAAGAAGATTGTGATGACGAGGTTCAAGGTTCTGCTCTGAAGCTCACGTTTGCTTGCAACTCTCCGATTTCCTGGCCTGCGATGTCAGGGGCATTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACCTTGGGAGTTGTGCTTCTTGTGGTTCCGTCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTAAAATTTGCAATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTCCCCTTCGGGCTCTGTGGGTGCCAGGAGGAAAATTCTAAAGGGAGAGATCTTGTGGAGATTGAAGAAGAATACGGTGATGGTTATCGTGGAAAGGAGTTTGAGAATTCAAGTCAAAGGATTCAGCTTCAGGTGCCTTTGCCTTCTTCATCTTTCGTTGTGTCAGTGGATGAATGGCAGACCATACAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGCGTGGAGTTTGTTGAGCAGATTGGCCCAAATTCGTACAAGGGAGTTTATATGGGGAAGAGGGTTGGGATTGAGAAGCTGAAGGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTCCACAAGGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTCTGCATTTCTGCGGTATTTGCGTGGATGATAATCATGGGCTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACCTGATGTTGAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCAGAAGGGATCAAGTTTATGAATGACCACGGTGTTGCATATAGAGACCTTAATACACAGAGAATTCTGTTGGATAGGCATGGGAATGCTTGCTTGGGAGATATTGGTATAGTTACTGCCTGCAAAAGTGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGTCATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAAATGGTAACTGGTGAGGCAGCATACTCTTCATTTTCACCTGTTCAAGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCAGAAATCCCAAAAGACTGCCAACAAACTCTAAAATACATTATGACAAAATGCTGGAACAACGCCCCTTCCAAACGCCCTCAGTTCTGTGAAATCTTAGCCATATTGCTGCGACCAAACTGCAACAACAGATAA 1740 0.4736 MAAALECWSSRATAAADDDTVEQVLMRTHHRSEGPASTPKDPSSIPNVHKKFQKLTRNVSEAIASFRNSLNLDSPPSSKADASSRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASETDQLAILIQEDCDDEVQGSALKLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVPSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDLVEIEEEYGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIQSGGDEIEKWLLNSDSVEFVEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILHFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDIGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTESWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKYIMTKCWNNAPSKRPQFCEILAILLRPNCNNR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01901 579 Gene3D Transferase(Phosphotransferase) domain 1 314 574 - -
Vian7g01901 579 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 90 571 - -
Vian7g01901 579 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Vian7g01901 579 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Vian7g01901 579 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Vian7g01901 579 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Vian7g01901 579 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
Vian7g01901 579 SUPERFAMILY Protein kinase-like (PK-like) 299 571 IPR011009 -
Vian7g01901 579 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01901 579 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01901 Vian-Chr7 30218124 30222398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01901 304 571 MAP Kinase Kinase Kinase AT2G17700 33.091 1.07e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vian7g01901 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01901 - - pvu:PHAVU_008G258400g 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01901 7 30218124 30222398 Vian7g01901 7 30218124 30222398 ECH
Vian6g00654 6 23234260 23237837 Vian7g01901 7 30218124 30222398 PCT