Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01894 ATGGAGAAGGTGGTGTGTGTCACCGGCGGCAGCGGCGCCATCGGTTCATGGCTCGTTCACCTCCTTCTGAACCGCGGCTACACTGTCCACGCCACCGTCCAAAATCTCAACGATGAGGCCGAGACGAAGCATCTAGAAGCCTTGGATGGAGCGCCGGCGCGCCTCCGCCTCTTCCAGATGGAGCTCCTCCACTACGATTCTGTCCTCGCCGCAGTGTGCGGCTGCGCCGGCGTGTTCCACGTCGCCTCTCCTTGCACTGTTGAACAAGTCCAGGACCCTCAGAAGGAGCTTCTGGACCCGGCGATAAAGGGCACCTTGAACGTGCTAACGGCAGCGAAAGAAGCAGGGGTACGTCGCGTGGTGGTCACGTCCTCCACCTCCGCGATTGTTCCGAGCCCTAATTGGCCCGGTGACGTTCCCAAGAGGGAGAACTGCTGGACTGACGTCGAATTTTGCAAGCAAAAGGGGTTGTGGTATCCATTGTCGAAGACTTTGGCCGAGAAGGCAGCTTGGGATTTTGCAAAGGAGACTGGGTTAGATGTTGTTGTAGTGAATCCTGGCAATGTGGTGGGTCCTGTGATTGCACCGAGGCTTAATGCAAGCATGGTCATGTTTGTGCGCCTACTTCAAGGAGTGTCCTTGGATATTGGGAATGTGAACCGGAGAAGTGCTAAAATACAGTGGCAATGTTACCAAAGTATCTTTGAGCCACAGGAGAAAAGTAGATTGCATGGTTGTGATGATACATATGAAAACTTTTTTATGGGATCGGTCCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATCAGAATAAATCTGCAGTTGGTAGGCATGTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTGGCCAAAGTTGCTGAACTTTATCCAGAGTACAATGTGCCTAAGATGCAACGAGATACCCAACCAGGATTATTGAGAGTGAAGGATGGATCAAAGAAACTTATGGATTTGGGTATGCAATTCATTCCTATGGAGAAAATTGTAAAGGATGCTGTTGAGGACTTGAAGAGAAAAGGGTTCATTTCATAA 1065 0.4995 MEKVVCVTGGSGAIGSWLVHLLLNRGYTVHATVQNLNDEAETKHLEALDGAPARLRLFQMELLHYDSVLAAVCGCAGVFHVASPCTVEQVQDPQKELLDPAIKGTLNVLTAAKEAGVRRVVVTSSTSAIVPSPNWPGDVPKRENCWTDVEFCKQKGLWYPLSKTLAEKAAWDFAKETGLDVVVVNPGNVVGPVIAPRLNASMVMFVRLLQGVSLDIGNVNRRSAKIQWQCYQSIFEPQEKSRLHGCDDTYENFFMGSVHFKDVALAHILVYQNKSAVGRHVCVEAISHYGDFVAKVAELYPEYNVPKMQRDTQPGLLRVKDGSKKLMDLGMQFIPMEKIVKDAVEDLKRKGFIS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01894 354 Gene3D - 1 354 - -
Vian7g01894 354 Pfam NAD dependent epimerase/dehydratase family 5 204 IPR001509 -
Vian7g01894 354 CDD FR_SDR_e 5 330 - -
Vian7g01894 354 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 344 - -
Vian7g01894 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 347 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01894 Vian-Chr7 30049794 30051936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01894 3 354 Monolignol Biosynthesis Gene Families AT5G58490 67.330 5.86e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01894 - - gmx:100803241 540.421