Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01890 ATGGGATGTACTTCAGTACTCAGAAGCCCCAAGAAAGAAGAACAAGAGGTACCAGATGCTATCAATTCTTTATTACCAAATTCTAACCAATCTTACAGCTATGAAGATTTCAATATTTTGGACGAAATGGAAGGGGTCTTCAACTCCAAAGAGGAACAAAACTTACTGCAACAAGACTCTTCGAGTGGCGAATTCCATTGGGATTTCATGGAATGGGAGGAATTTGCTCGCATTGAAGAGGAAGGAGAAGACGAAAACGAAGGAAAAGAGCAGGTAACAGAGAGCATGAGGCAGTACCCTTTTGAAGAGAAGCAGATAAAGAGAGAAAACATTGTTGGGTTTTGGGAAATGGATGATGAGAAGATGATGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTTTGGGCTGATGACTGTTCTCTTTCCTTGGAAACCAACAATGCTTACTATAATGGAGAAGTGCCAGTGTTGGAAGAAGAGAGAGCGAGAAGGGAAGCAAGTGTTCTTAGATACAAAGAGAAACGTCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4113 MGCTSVLRSPKKEEQEVPDAINSLLPNSNQSYSYEDFNILDEMEGVFNSKEEQNLLQQDSSSGEFHWDFMEWEEFARIEEEGEDENEGKEQVTESMRQYPFEEKQIKRENIVGFWEMDDEKMMALNLNLNYQEVLDAWSNRGSLWADDCSLSLETNNAYYNGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01890 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 12 216 - -
Vian7g01890 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Vian7g01890 217 MobiDBLite consensus disorder prediction 1 31 - -
Vian7g01890 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01890 Vian-Chr7 29992449 29993544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01890 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 4.96e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian7g01890 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01890 - - aprc:113847792 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01890 7 29992449 29993544 Vian7g01890 7 29992449 29993544 ECH