Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01887 ATGAAGAAGCTTATGCTGATGTTGATAACCTCACCAGAAGACGGGGATCTAAGATTCCAAGACCATTTGCACACTCAAAATAATTCACCTTCACAAGATGACATCCAGCAACAGCTTATGAATTGTATAAAGGAGCTTGAGAAGGAGAATAAGATGCTTGTTCCCTTTTTTTGTGGTCATGTGGACAAATACCTTGAAGCCGAATTTGGCTCCAAAGAAGAACCGTATGCTGATATCAACTTTGTGTTGGATGCACTTCCATCGGAAATTATGAGGCGCCTTAAGGAAATCGTGAAGCTGATGGTAGACGGAGGTTTCGTAGAGGAATGCAGCGACATTTACAGCACATGGCGAAGGGAGTTTGCAGAACAGTGTCTACTAGAACTTCTGCAATTTCAATTGCCCATCAAAATGGACTTTTGGAAGTGGTCAGCAGCGTGCAAGGCAGCTTGGAAGATGTTTTTTCCCAATGAAAGAAGACTCTGCGATTTCCTCTTTTCAGGTTTATCTGTCGCTGCGGATGTCTCCTTCGATAAATTTTGCAAGAGTCTGACGACTGTTCTACTGGAATATGCCCATACCATAACAACTCAGAGCTATACGCAGTATACGCTTCTCGTGGACGCCCCTAGAATGTTGATGTCATTAGGCAAGCTGGAACCGGAGTTCATCGCTTATAACAATTTGTCGTTCGTACGTGATGTTCGAGACATTCAGCAAAGATTGGCTATGATAAACAGCTTTAGGTATATTATTTACCCTGATATTGTGGAGGCACCTGCTACCGACGGAGGGCTTCATCTCATTACTAAGGAATCAATGAACTACATCCTTGGAATTTGTGAAGGTATGATATACCAGAGGGATTGTGAAACTTACTGCATCGAAAATTCTTCATTTTGGGTGGTGATAGGAAAGATGATTGAGTTGTTAGAGAGCGAGTTGGAACTCGAGTCTACACGCTGA 966 0.4265 MKKLMLMLITSPEDGDLRFQDHLHTQNNSPSQDDIQQQLMNCIKELEKENKMLVPFFCGHVDKYLEAEFGSKEEPYADINFVLDALPSEIMRRLKEIVKLMVDGGFVEECSDIYSTWRREFAEQCLLELLQFQLPIKMDFWKWSAACKAAWKMFFPNERRLCDFLFSGLSVAADVSFDKFCKSLTTVLLEYAHTITTQSYTQYTLLVDAPRMLMSLGKLEPEFIAYNNLSFVRDVRDIQQRLAMINSFRYIIYPDIVEAPATDGGLHLITKESMNYILGICEGMIYQRDCETYCIENSSFWVVIGKMIELLESELELESTR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01887 321 Coils Coil 308 321 - -
Vian7g01887 321 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 318 IPR004140 GO:0000145|GO:0006887
Vian7g01887 321 Pfam Exo70 exocyst complex subunit 142 293 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian7g01887 321 Gene3D Exocyst complex component Exo70 14 321 - -
Vian7g01887 321 SUPERFAMILY Cullin repeat-like 72 320 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01887 Vian-Chr7 29878854 29879819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01887 74 319 EXO70 exocyst subunit family AT5G58430 31.365 4.11e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01887 - - vum:124834304 593.193