Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01886 ATGTCGCTTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATTGATCTACTATATTTCTTCTGCGGAGGTCTAACAGTACAACTCATGAAGATCAAATTGTGGTTAGTCACTGTTGGAGGGGGTTTCAGTTATTCCCTCCTCCAGCTTCGTTACTATCCGAGCGACACAGACGGGGAGAACCTTCGGCTCGAGGACCACAATCAAATAATCATTCAAGTTAATGACTCAGAGAGTGTTAGTAGTACAAGTCACGAAGAAGCTAATGCTGATGTTGATAGTACTCAAGGCACCTCACCAGAAGATGGGGATCTTAGATTCCAAGACCATCTACTCACTCAAAGTAATTCACATTCACAAGATGGAAGCGTTGATGATGGTCTTATCATCCAACAACAGCTCATGAATTGTATAAAGGAGCTTGAGAAGGAGAATCATATGCTTGTTTACATGGTTTGTAGTCACGTGGACAAATACCTTAAAGCCGTGTTCGACTCCAAAGAAGTACCGGATCCTGACATCAACTTAGTGATGGATGCACTTCCATCGGAAATCATGAGGCGCCTTAAGGAAACCGTGAAGCTGATGGTGGATGGAGGTTTTAAGGAGGAATGCAGCGACATTTACAACAAATGGCGAAGGGAGTTTTTAAAACAGTGTCTGCAGAAACTTGGGTTGCAAATTGAATTGCAATCTGAAGAGTCCAACGAATGGAAGATTATGAACTGGTTAGACACGTGCAAGGTAGCGGAGAAGATACTGTTTCCCAATGAAAGGAAACTCTGCGATTACCTCTTTTCAGGGTTTTCTGTGGCTGCGGATGTTTCCTTCGATAAGGTTTGCGAGGAACTGATGATTGGTTTATTAAGTTTTGTCAATACCACCATAACAATCGGGAGCTATTTGTCGGATCTTTTGCTCGACTTCTTTCCTAAAATGTCGAATTCATTGGGCAAGCTGATTCTGAATTTCACTTCAGAGACGTCGTTTGTAGATGATATTCAAGACGTTGGGCAAAGATTGGCTATGCTAAACAACTTTGGGCTTATTGTTTACACTAATAATGTGCAGGCACCAGTCACCGTCAGAGGGCTTCATCTAATTACTATGGAAGCAATGGATTTCATCCATTGGATAACAAAGAAGAGGGTTGACCGATCTGACAGCATCGGAAATTTTTTATTCTGGGTGATGATAGTAAGGATGATTGAGTTGTTAGAGAACGAGTTGGTAGCCAAGTATGAAAACTACTATCCTAACCCTGCATTGGGCCATGCTTTTATGATCAATAATCTCAGTTACATAGAACAAAAGACGCGTGATTTGAAATTGAACGATGATTGGTTTAGACAAAACGCAGCAAAGGTGGAACAATACTGCAACGTGCATCTAAGAAGTAAGTCACAACAAGCTAATGCTGATGTTGATAGTACTCTTGGTACCTCACCAGAAAATCTAAGAAGGATGTCACAACAAGCTAATGCTGATGTTGATACTTCTCTTGGTACCTCACCAGAAGATGGGGATCTTAGATTTCGAAGCTATCTACTCATTCAAACCAGTTCACATTCACAAGAAGATGTTCTTATCATCCAACAACTCACGAACTGTGTAAAGGAGCTTGAGAAGGAGAATCAGATGCTTGTTCCCAGGGTTTGTAGTCACGTGGACAAATACCTTAAAGCCGTGTTTGACCCCAAGGAAGTACCGGATCCCTACATTAACTTGGTGATGGATTCACTTCCATCGGAAATTATGAGGCATCTCAAAGAAACCGTGATGCTGATGGTGAATGCAGGTTTCATGGAGGAATGCAGCGACATTTACATCAAATGGCGAAGGGAGTTTCTAGAACAGTGTCTGCGGGCACTTGGGTGGCAATTTCAGACGCCCAGCAATGACGATTTTGAGAAGTGGTTAAAAACGTGCAAGGCAGCTGCAAAGGTACTGTTTCCCAATGAAAAGAGACTCTGCGATTATCTCTTTTCAGAGAGACGTTTTGATGCGGATGTCTTCTTCGAGAAGGTTTACAAGAAACTGACGACTGGTCTACTGAGTTTTGCCGATGTCACCATAACAACGGAGAGCCATTTGCCGAATCTTTTGTCCAACATCGTCCCTAAAATGTTGGAATCATTGCACGAGCTGATAGGGGAGATCTCAGCCATGTGTTTTCCCAAATTGTCGTGCGTACCTGATCTTGAAGACTTTCGGAAAAAATTGTCTATTTTATGCGGTTTGAGGAATACTATTTATACTAATAATGTGCAGGCACCTGTCATCCACGGAGGGCTTCATCTGATAACTTGGGAAACAATGAACTACATCCTTGATAATTCTGGCAACATTGGATATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAGTTGTTAGAGAGCGAGTTGGAAGTGAAATCTAAAGACTACTACGCTGACCCCGCATTAGGCTATATTTTTATGATCAATAATCTCAGCTACATAGAACAAAAGACGCGTGATTTAAAATTCCACGATGATTGGTTTCGACAAAACACAGCAAAGGTGGAACAAAAGTGCAACCTATATCTAAGAAGGTCGTGGAATAAGATGATGGAGTTTTTGAAGGTTGAGACAAAGGAGTGGGCCGAAGCTCATGTGGTAGCGGAGTTAATGATAGAAAATATCCGTTTGTTCAACCTGCACTTTGAGGAGACATGCACAATTCAATCTACATGGACGGTCTCTGATAAACAACTGAGGGAACGAATAATAAAATCCATTGAAGGGTTCTTGTTGCCAGAATATGGAAAATTTTATAACAGCTTTCTAGTTGTTCTTGGTAATCAAGCTGACGAGTATATTGAGTTTGGATTTCAAGACATTCGAAATTGTCTCAGCAATTTGTTTCTTCTAGATGAGGAGACGAATCTAGAATACAAGAAAAATGTATGA 2934 0.4127 MSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVTVGGGFSYSLLQLRYYPSDTDGENLRLEDHNQIIIQVNDSESVSSTSHEEANADVDSTQGTSPEDGDLRFQDHLLTQSNSHSQDGSVDDGLIIQQQLMNCIKELEKENHMLVYMVCSHVDKYLKAVFDSKEVPDPDINLVMDALPSEIMRRLKETVKLMVDGGFKEECSDIYNKWRREFLKQCLQKLGLQIELQSEESNEWKIMNWLDTCKVAEKILFPNERKLCDYLFSGFSVAADVSFDKVCEELMIGLLSFVNTTITIGSYLSDLLLDFFPKMSNSLGKLILNFTSETSFVDDIQDVGQRLAMLNNFGLIVYTNNVQAPVTVRGLHLITMEAMDFIHWITKKRVDRSDSIGNFLFWVMIVRMIELLENELVAKYENYYPNPALGHAFMINNLSYIEQKTRDLKLNDDWFRQNAAKVEQYCNVHLRSKSQQANADVDSTLGTSPENLRRMSQQANADVDTSLGTSPEDGDLRFRSYLLIQTSSHSQEDVLIIQQLTNCVKELEKENQMLVPRVCSHVDKYLKAVFDPKEVPDPYINLVMDSLPSEIMRHLKETVMLMVNAGFMEECSDIYIKWRREFLEQCLRALGWQFQTPSNDDFEKWLKTCKAAAKVLFPNEKRLCDYLFSERRFDADVFFEKVYKKLTTGLLSFADVTITTESHLPNLLSNIVPKMLESLHELIGEISAMCFPKLSCVPDLEDFRKKLSILCGLRNTIYTNNVQAPVIHGGLHLITWETMNYILDNSGNIGYSSFWVVIGRMIELLESELEVKSKDYYADPALGYIFMINNLSYIEQKTRDLKFHDDWFRQNTAKVEQKCNLYLRRSWNKMMEFLKVETKEWAEAHVVAELMIENIRLFNLHFEETCTIQSTWTVSDKQLRERIIKSIEGFLLPEYGKFYNSFLVVLGNQADEYIEFGFQDIRNCLSNLFLLDEETNLEYKKNV 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01886 977 MobiDBLite consensus disorder prediction 76 105 - -
Vian7g01886 977 PANTHER EXOCYST COMPLEX PROTEIN EXO70 532 963 IPR004140 GO:0000145|GO:0006887
Vian7g01886 977 Gene3D Exocyst complex component Exo70 109 498 - -
Vian7g01886 977 Gene3D Exocyst complex component Exo70 511 970 - -
Vian7g01886 977 SUPERFAMILY Cullin repeat-like 148 460 IPR016159 -
Vian7g01886 977 Pfam Exo70 exocyst complex subunit 781 960 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian7g01886 977 Pfam Exo70 exocyst complex subunit 638 776 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian7g01886 977 Pfam Exo70 exocyst complex subunit 242 462 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian7g01886 977 MobiDBLite consensus disorder prediction 76 102 - -
Vian7g01886 977 SUPERFAMILY Cullin repeat-like 549 963 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01886 Vian-Chr7 29856440 29859373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01886 566 963 EXO70 exocyst subunit family AT5G58430 34.554 2.95e-60 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01886 - - var:108336450 1967.59