Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01884 ATGAATGGTTGGATGAATACGATGGCCATGTTCAGCCAAATTCTGAGATGGATGAAAAAACCAAAGGTACTGAGATTACTATGTCTCGCTTCAACTGTTGTTGGACTGATCTGTTATGGACTCAGTTCGTTTCTAAACCATTTGCTCGGAAACTGGAGCTGCTGGAAGATGTTTCTTTATATTGTTTTCAGTTTCATTGTTTGCCTTGCCGTATTGTTCGCACCGGCAAGGTCGAGCTCCACCTCTCTCCGGTTGGAAGCTCATTTGGCATTTTTGGTTCTAATGCTCACTTCTGTTTATTCCTTTTTCATTGATAACGTGGTGAAGGGTAAACCTGATGCATACAGTCTCATCTCTTGTGCTGCTTTTGCTACCATGTCACTTAGCTTGTCAAATCTCAGTCAATTTGGATTCCAAATTGATCTACTCTATTTCTTCTGCGGAGCTCTAACAATACAACTCATGAAGATCAGATTGTGGTTAGTCATTGTTGGAGCAGGTTTCACTTATTCCCTCCTCCAGCTTCGTGACTATCCGAGTGACACACCAGAGGAGAATCTTCAGCCCGACGAAGAAAATCAACTCTTAATCATTGAAGTTGATGACACAGAGAGTGATGCACAACAAGCTAATTTTGATGTTGATAGTACTCTAGGTAGTTCACCAGAAGATGAGGATCTTAGATTTCGAGACCATCTACTCACTCAAAGCGATTCACATCCGGAAGATGCTGGTCTTATCATTCAACAAGAATTCATGAATTGTATAAAAGAGCTTGAAAAGGAGAATCAGAGGCTTGTTCCCATAGTTGGTAGCCACGTCGAAAACTACATTAAAGCCGTGTTTGACTCCAAAGAAGTATCGGATCCTAACGTCAACTTGGTGATGGATGTACTTCCATTGGGAATTATGAGGCGCCTTAAGGAAAACGGGAAGCTGATGGTGGATGCAGGTTTCATGGACGAATGCATCGACATTTACAGCAAATCGCGAAAAGCGTTTGTAGAACAGTGTCTACGGCCACTTGGGTTGCAATTTCAAACGCCCAACAAGGACGTTGAAAAGTGGTCAAAAACGTGGAAGGCTGTTGGGAAGATACTGTTTCCCAATGAAATGAGACTCTGCAGTTACATCTTTTCAGGGATACATGATGCTGCGGGTGTCTCCGCAGTCGAGAAAGTTTGCAAGAAAATTTCGACTGATCTACTAAGTTTTACCGATACCACCATAACAGCTGATAACTATTTGCCGAATCTTTTGTCTTACATCGTTCCTAAAGTGTCGGAGTCATTGGGCGAGCTGACACCAGAGTTAATCTCACCGACTTCGGTTCACGAATCGTCTATTGTTGATGATATTAAAGATGTTCGGCAAAGTTTGGGTATGCTAAACCAGTCGAGGGATAGTATTCACCCTAATAATAATGATATTAAAGACGTTCGGCAAATATTGGCTATGCTAAACAAGATTGGGGGGAATATTCTTTACCCCAATAAGGAGAAGACAGGTCTGATAGATGGAGGGTTCCATTTAGTTACTGATTTGCTGAAGAAGAAGATACGGAAATTATAG 1572 0.4179 MNGWMNTMAMFSQILRWMKKPKVLRLLCLASTVVGLICYGLSSFLNHLLGNWSCWKMFLYIVFSFIVCLAVLFAPARSSSTSLRLEAHLAFLVLMLTSVYSFFIDNVVKGKPDAYSLISCAAFATMSLSLSNLSQFGFQIDLLYFFCGALTIQLMKIRLWLVIVGAGFTYSLLQLRDYPSDTPEENLQPDEENQLLIIEVDDTESDAQQANFDVDSTLGSSPEDEDLRFRDHLLTQSDSHPEDAGLIIQQEFMNCIKELEKENQRLVPIVGSHVENYIKAVFDSKEVSDPNVNLVMDVLPLGIMRRLKENGKLMVDAGFMDECIDIYSKSRKAFVEQCLRPLGLQFQTPNKDVEKWSKTWKAVGKILFPNEMRLCSYIFSGIHDAAGVSAVEKVCKKISTDLLSFTDTTITADNYLPNLLSYIVPKVSESLGELTPELISPTSVHESSIVDDIKDVRQSLGMLNQSRDSIHPNNNDIKDVRQILAMLNKIGGNILYPNKEKTGLIDGGFHLVTDLLKKKIRKL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01884 523 PANTHER EXOCYST COMPLEX PROTEIN EXO70 252 461 IPR004140 GO:0000145|GO:0006887
Vian7g01884 523 Gene3D Exocyst complex component Exo70 234 478 - -
Vian7g01884 523 SUPERFAMILY Cullin repeat-like 251 444 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01884 Vian-Chr7 29784044 29785615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01884 287 440 EXO70 exocyst subunit family AT5G58430 33.533 4.91e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01884 - - vum:124826138 993.416