Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01883 ATGCAAACCTTGATCATGCTCAACCAAATTCTAAGATGGCTGAAGAGACCAAAGGTACTGAGACTTGTATGTCTTGCTTCATCTGTTGTTGGATTGCTCTGTTATGCACTCAGTTCCTCTTTCAAGTATTTACTAGGAAACTGGAGCTGGTGGAAGATGCTTATTTATATTGTTTTCAGTTTCATCATTTGCCTAGCCGTCTTGTTCACACCTGCAAGGTCGAGCTCCACCTCTCTCCGGTTGGAAGCTCATTTGGCATTTTTGGTTCTAATAATCACTTCTGTTTATTCCTTTTTCTTCGATAACGTGGTGAAGGGTAAACCTGATGCATACAGTCTCATCTCTTGTGCTGCTTTTGCTACCATGTCGCTTGGCTTGTCAAATCTCACTCAATTTGGATTCCAGATCGATCTGCTATATTTCTTCTGCGGAGGTTTAACAGTACAGCTCATGAAGATCAAATTGTGGTTAGTCACTGTTGGAGGTGGTTTCACTTATTCCCTCCTCCAGCTTCGTCACTATCCGAGCTACACACAAGGGGAGAATCTTCAGCTCCTGAACCAAAATCATGTGATCATTCAAGTCGATGATTCAGGAAGAATTAGTAGTAGCAGTCCTGTTATCATGGAACAACAAGCTAATGCTGATGTCGGTAGTACTCTAGGCACCTCACCAGAAGATGGGGATCTTATTCAAAGCAATTCAACTTCAGAAAATGGAAGCGTTGATGATGGTCTTTTCGTCCAACAACAGTTCATCAACTGTATAAAGGAGTTTGAAAAGGAGAATCAGATGCTTGTTCCCATGGTTTGTAGTCACGTGGAGAAATACCTTAAAGCCGTGTTTGACTCCAACGACAAAGACAAGGACCAGATTCAAATGTTGGAAGTACCGGTTCCAGACGTCAACTTGGTGATGGATGCACTTCCATTTGAAATTATAAGCCGCCTTAAAGAAATCGTGAAGCTGATTGTGGAAGGAGGTTTTACGGAGGAATGCAGCGACATTTACAGCAAATGGCGAAAGGAGTTTGCAGAACAGTGTCGGCGGGCACTTGGGTTGCAATTTCAGACGCCCAAGGATGAGGACGTTGAGAAGTGGTTAAAAACGTGTAAGGCAACTTCGAAGATACTGTTTCCCAATGAAAGGAGACTCTGCGATTACCTCTTTTCAGGGTTCTCTGTCGCTGCGGATGCCTTCTTCGACAAGGTTTGCAAGGAACTGACGATTGGACTAGTGAGTTTTGCCGATACCACCGTGACAACTGGGAATTTGCCGAATCTTCTGTTCAACATTGTCCCTAAAATGTCGGAGCCATTGGTCGAGTTGACACGGGAGTTCATCTCACCGATTTTGTTTGGCAAATTCTCGTTTGTAAATGATATTCAAGACGTTCGGCGAAGATTGACTGTGCTAAACAAGTTGAGGAAACTTACTTATCCCAATAATGTGCAGGCACCTGTTACTGATGGAGGGCTTCATCTGATTACTAAGAAAGCAATGGACCACATCCATACAATGTTTAAAGGTAAGATAAAGCAAAAGTTTGGCCAAGCTTACCGCTTCGTAAATTCTTCATTTTGGGTGGTGATAGGAAGGATGATTGAGTTGTTAGAGAGCGAATTGGAAGCCAAGTCTAAAGACTTCTACGCTGACCCCGCCCTGAGCTCTGTTTTTATGATCAATAATCTCAGCTACATAGAACAAAAGACGCATGATTTGCAATTCGACGATGATTGGTTTCGAACAAACACAGCAAAGGTGGAAGAAAACTACAACCTGTATCTAAGAAGTTCGTGGAATAAGATGGTGGACTTTTTGAAGGTTGAGACGAATGAGTTGGCGGAGGCTGATGTGGTAGCGGAGTTAATGAAAGAAAAGCTCAATTTGTTCAACCTGCACTTTGAGGAGACATGCACAATTCAATCTACATGGACTGTCTCTGATAAGCGACTGAAGGAACGAATAGTAAAGTCCATAGAGGAGATTTTGTTACCAGAATATGGAAAGTTTTGTGACAGGTTTCGAGTTGTTTTTGGTAATCAAGCTTATCACTATATTAAGTTTGGATTTCTAGACATTCAAAATTGTCTCAGCCATTTGTTTCTTCTAGATGATGAGATGACTCTCGAAGACAAGAAAACTGTATGA 2151 0.4207 MQTLIMLNQILRWLKRPKVLRLVCLASSVVGLLCYALSSSFKYLLGNWSWWKMLIYIVFSFIICLAVLFTPARSSSTSLRLEAHLAFLVLIITSVYSFFFDNVVKGKPDAYSLISCAAFATMSLGLSNLTQFGFQIDLLYFFCGGLTVQLMKIKLWLVTVGGGFTYSLLQLRHYPSYTQGENLQLLNQNHVIIQVDDSGRISSSSPVIMEQQANADVGSTLGTSPEDGDLIQSNSTSENGSVDDGLFVQQQFINCIKEFEKENQMLVPMVCSHVEKYLKAVFDSNDKDKDQIQMLEVPVPDVNLVMDALPFEIISRLKEIVKLIVEGGFTEECSDIYSKWRKEFAEQCRRALGLQFQTPKDEDVEKWLKTCKATSKILFPNERRLCDYLFSGFSVAADAFFDKVCKELTIGLVSFADTTVTTGNLPNLLFNIVPKMSEPLVELTREFISPILFGKFSFVNDIQDVRRRLTVLNKLRKLTYPNNVQAPVTDGGLHLITKKAMDHIHTMFKGKIKQKFGQAYRFVNSSFWVVIGRMIELLESELEAKSKDFYADPALSSVFMINNLSYIEQKTHDLQFDDDWFRTNTAKVEENYNLYLRSSWNKMVDFLKVETNELAEADVVAELMKEKLNLFNLHFEETCTIQSTWTVSDKRLKERIVKSIEEILLPEYGKFCDRFRVVFGNQAYHYIKFGFLDIQNCLSHLFLLDDEMTLEDKKTV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01883 716 PANTHER EXOCYST COMPLEX PROTEIN EXO70 248 702 IPR004140 GO:0000145|GO:0006887
Vian7g01883 716 Gene3D Exocyst complex component Exo70 243 707 - -
Vian7g01883 716 MobiDBLite consensus disorder prediction 218 240 - -
Vian7g01883 716 Pfam Exo70 exocyst complex subunit 366 699 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian7g01883 716 SUPERFAMILY Cullin repeat-like 263 702 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01883 Vian-Chr7 29776115 29778265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01883 285 702 EXO70 exocyst subunit family AT5G58430 37.194 1.32e-72 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01883 - - vra:106752607 1145.18