Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01867 ATGACCATGAACGGCCACGGCCACCATACCGTAAACATCGGTAACAGCAACAACAACCCTAACGACGACGACGACGAGACCAACGTCTTCCATCCTTCCTCCTCTTCCGCTGACGGCGACAACAACAGCAACCACCGTGAAGATGACGACGAAGAACTCGTGGATCCCGACGATCCTTTCGACATTACTCATACGAAGAACGCCTCGCACGACACGCTTCGCCGTTGGAGACAAGCAGCGCTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTCTGCTTTTCAGATTGGCCGGGGAACGTGAACTAGTGATAAGTACAGCAGTGTCACCCCCAACTCCAGCTGGTGATTATGATATCGGGCTCGAACAACTTGTTTCCATGTCTAAGGATCAGAATACTTCTGCTTTTCAGCAATATGGAGGGATTGGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTATTAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGAAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATAATAGCTGCTGCGGTGTCATTGGTACTCGGAATAAAAACAGAGGGTTTGGCTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTTTGCTTGTCATTGTAGTTACAGCTGTCAGCGATTATAGGCAATCTCTGCAGTTTCAGAATTTGAATTCAGAAAAACAAAACATACAATTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATGTCGATATTTGATATTGTTGTTGGTGATGTCGTACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTTTCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAATCACCATTTTTGATGTCTGGTTGCAAAGTAGCGGATGGAGTTGGTGTTATGCTGGTTACTGGCGTTGGTATTAATACCGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGACAATGGAGAAGAAACTCCGTTACAGGTACGCTTGAATGGAGTAGCAACCTTTATTGGTGTAGTTGGGCTTAGTGTAGCTGTTTTAGTGCTTGCCGTCCTCTTGGGCAGATACTTTTCCGGCCATACCAAAGATGTAGATGGACAAGTTGAATTTGTCGCCGGAAAGACTAGTGCCAGCAATGTAGTAGATGCGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTACCTCTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCTGACAAGGCCTTGGTTAGGCGGCTATCCGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTAGTGGAGGCATATGTTGGGAGCACAAAAGTAAATCCACCAGACGACTCATCAAAGTTGAATCCAAAAGCTTTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACCGGAAATGTTTTTGTTCCCAAGGACGGTGGAGAGACAGAGGTGTCTGGATCTCCTACAGAAAAGGCAATTCTTTCATGGGCATTAAAGCTGGGAATGAATTTTGATGTTACCAGATCAAATTCAAAAGTTCTCCATGTGTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAGCTGGGGGGTTCTGAAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGAGCATGCACTCAATATCTTGATTCAGATGGTCAAATGCAATCCATTGAAGAGAAGAAGGCTTTTTTCAGGCAATCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTAGCTATTGCATACAGGTCATATGAACTGGACAAAGTTCCATCTAGTGAGCAGGACTTAGACCAATGGTCCTTACCGGAACATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTAAAACTGTGCTCTGATGCCGGTGTTAAGGTACGCATGGTTACCGGGGACAACCTCCAAACAGCTAAGGCAATAGCTTTGGAGTGTGGAATACTGGCTTCAAGTGAAGAAGCCGTTGAGCCAACTATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATTGTGCCAAGAAAATAACTGTCATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCCCTACGTAAAGGAGGGGAAGTTGTTGCTGTCACAGGAGACGGCACCAATGATGCTCCTGCACTTCATGAGGCAGACATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGTTCAGATATTATAATCCTAGATGATAACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGGCGCTCTGTATATGCAAATATTCAAAAATTTATTCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCCATAACTTCTGGTGATGTTCCTCTAAATGCAGTACAACTTTTGTGGGTCAACCTTATCATGGATACACTTGGGGCGCTTGCACTGGCTACTGAACCGCCAACAGACAGCCTAATGCGCAGATCACCAGTTGGCCGAAGAGAACCTCTTATAACAAATATCATGTGGAGAAACCTGATTGTACAGGCTGTCTATCAAATCACAGTTCTTCTCGTTCTTAACTTCCATGGTGAAAGTATTCTACCCAAACAAGATACTAGAGCTGATTCCTTTCAAGTAAAGAATACTTTAATTTTCAACGCGTTCGTCCTGTGCCAATTATTCAATGAATTCAATGCTCGGAAACCCGAGGAAATGAATGTTTTCCGTGGGGTGACAAAGAACAAACTTTTCATGGGAATTGTTGGAGCAACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGGCTTGATTGGAAGCTGTGGCTTGCTTCTCTTGTTATTGGCTTTGTCAGCTGGCCCCTTGCTATAGCTGGAAAATTCATTCCAGTTCCAAAAACACCATTGGCTCGTTACTTCAAGAAGCCACTAAGGAGATTAAGAAGGTCTAGATCTCGTGCTGCATAA 3312 0.433 MTMNGHGHHTVNIGNSNNNPNDDDDETNVFHPSSSSADGDNNSNHREDDDEELVDPDDPFDITHTKNASHDTLRRWRQAALVLNASRRFRYTLDLKKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVSPPTPAGDYDIGLEQLVSMSKDQNTSAFQQYGGIGGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNSEKQNIQLEVIRGGRTIKMSIFDIVVGDVVPLKIGDQVPADGVLITGHSLSIDESSMTGESKIVHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHTKDVDGQVEFVAGKTSASNVVDAVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKVNPPDDSSKLNPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWALKLGMNFDVTRSNSKVLHVFPFNSEKKRGGVALKLGGSEVHIHWKGAAEIVLGACTQYLDSDGQMQSIEEKKAFFRQSIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKLCSDAGVKVRMVTGDNLQTAKAIALECGILASSEEAVEPTIIEGKKFRELSEKEREDCAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRREPLITNIMWRNLIVQAVYQITVLLVLNFHGESILPKQDTRADSFQVKNTLIFNAFVLCQLFNEFNARKPEEMNVFRGVTKNKLFMGIVGATFILQIIIIEFLGKFTSTVRLDWKLWLASLVIGFVSWPLAIAGKFIPVPKTPLARYFKKPLRRLRRSRSRAA 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01867 1103 MobiDBLite consensus disorder prediction 1 69 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 833 1081 - -
Vian7g01867 1103 Pfam Ca2+-ATPase N terminal autoinhibitory domain 57 100 IPR024750 GO:0005516
Vian7g01867 1103 SUPERFAMILY Calcium ATPase, transduction domain A 287 382 IPR008250 -
Vian7g01867 1103 Pfam Cation transporting ATPase, C-terminus 901 1076 IPR006068 -
Vian7g01867 1103 Gene3D - 217 1067 - -
Vian7g01867 1103 NCBIfam HAD-IC family P-type ATPase 783 897 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian7g01867 1103 NCBIfam HAD-IC family P-type ATPase 449 539 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian7g01867 1103 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 713 IPR023299 GO:0000166
Vian7g01867 1103 Pfam E1-E2 ATPase 286 487 - -
Vian7g01867 1103 Gene3D - 68 122 - -
Vian7g01867 1103 PANTHER CATION TRANSPORTING ATPASE 112 1079 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 68 124 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 265 385 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 217 274 - -
Vian7g01867 1103 ProSitePatterns E1-E2 ATPases phosphorylation site. 511 517 IPR018303 -
Vian7g01867 1103 MobiDBLite consensus disorder prediction 1 23 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 709 861 - -
Vian7g01867 1103 SFLD Haloacid Dehalogenase 491 868 - -
Vian7g01867 1103 Pfam haloacid dehalogenase-like hydrolase 506 830 - -
Vian7g01867 1103 Gene3D - 190 385 - -
Vian7g01867 1103 Gene3D - 519 716 IPR023299 GO:0000166
Vian7g01867 1103 NCBIfam calcium-translocating P-type ATPase, PMCA-type 156 1079 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vian7g01867 1103 SMART Cation_ATPase_N_a_2 168 239 IPR004014 -
Vian7g01867 1103 SUPERFAMILY HAD-like 507 921 IPR036412 -
Vian7g01867 1103 Gene3D - 506 861 IPR023214 -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 816 835 - -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 731 741 - -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 509 523 - -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 840 852 - -
Vian7g01867 1103 PRINTS P-type cation-transporting ATPase superfamily signature 709 720 - -
Vian7g01867 1103 CDD P-type_ATPase_Ca_PMCA-like 191 949 - -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 519 716 - -
Vian7g01867 1103 Pfam Cation transporter/ATPase, N-terminus 170 234 IPR004014 -
Vian7g01867 1103 FunFam Calcium-transporting ATPase 9 plasma membrane-type 363 533 - -
Vian7g01867 1103 SFLD p-type atpase 491 868 IPR044492 -
Vian7g01867 1103 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1079 IPR023298 -
Vian7g01867 1103 PRINTS Sodium/potassium-transporting ATPase signature 502 523 - -
Vian7g01867 1103 PRINTS Sodium/potassium-transporting ATPase signature 252 272 - -
Vian7g01867 1103 PRINTS Sodium/potassium-transporting ATPase signature 628 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01867 Vian-Chr7 29525325 29539256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01867 39 1100 Primary Pumps ATPases AT3G21180 76.482 0.0 1659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01867 K01537 - gmx:100777143 1894.01