Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01862 ATGGGCAAGGCTTGCGAGCTTTGCAATAACCAAGCTTCCCTCTATTGTCCCGCCGATTCCGCATTTCTCTGCGGCGACTGCGACACCGCCGTGCACGCCGCCAACTTCCTCGTCGCTCGCCACTTCCGTCGCCGTATCTGCGCCAAATGCAATCGTTCCACCGGAATCTACATCGCCGGCGCCACCTTTCCATCCACCTGCACCTCTTGCTCGCCGGAGAAGGCTCTTTCCGACGACGGCGATTCTCTCCCTTCGTCCTCCACCTGCGTCTCGAGTTCCGAGTCCTGCGCCACGAAGAAGATTAAGGCGACGCGCGGCGCGGCGGGGAAGAAAAGGAGGAGGAGTTTTTCGAGTTCGGTGACCGGCGACGCGTCTCGGGAAGCGAAGAAGCAACGGGAGAAGGTCGGATCGGTGGAGCAGGAGGAGGTGTTCGCAAAATGGAGCAGAGAGATAGGTTTAGGGTTCGGAATAGGAGAGAACGGTAACCGCGTGGCGTCGCACGCTCTGAGCGTGTGCCTCGGAAAGTGGAATTTGCTTCCGTTCAGGGTGGCCGCGGCGACGTCGTTTTGGCTGGGCCTGAGATTTTGTGGGGACAGAAGTGTGGCCACGTGGCAGAATCTGGTGAGGTTGGAGAAAATCTCCGGAGTGCCAGCTAAGCTGATTCTGGCCGCACATGCAAACCTCGCACGTGTCTTGACGCTACCCCGCGATTTGCACGAGGGATGGGGCGAGTCATAG 738 0.5949 MGKACELCNNQASLYCPADSAFLCGDCDTAVHAANFLVARHFRRRICAKCNRSTGIYIAGATFPSTCTSCSPEKALSDDGDSLPSSSTCVSSSESCATKKIKATRGAAGKKRRRSFSSSVTGDASREAKKQREKVGSVEQEEVFAKWSREIGLGFGIGENGNRVASHALSVCLGKWNLLPFRVAAATSFWLGLRFCGDRSVATWQNLVRLEKISGVPAKLILAAHANLARVLTLPRDLHEGWGES 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01862 245 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Vian7g01862 245 SMART bboxneu5 1 46 IPR000315 GO:0008270
Vian7g01862 245 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 95 - -
Vian7g01862 245 CDD Bbox1_BBX-like 4 46 - -
Vian7g01862 245 MobiDBLite consensus disorder prediction 103 134 - -
Vian7g01862 245 Pfam B-box zinc finger 4 33 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01862 Vian-Chr7 29438039 29438776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01862 1 245 C2C2-CO-like Transcription Factor Family AT3G21150 31.873 1.98e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01862 - - pvu:PHAVU_008G254400g 392.504