Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01847 ATGGGGATATATCTCAGCGCGCCCAAAACAGAGAAGGCCTCTGAAGATGGCGAGAACGACAAGCTGCGGTTTGGTTTGTCTTCCATGCAGGGTTGGCGGGCTTCCATGGAAGATGCTCATGCAGCTATCCCATATTTGGACGAGTCTACATCTTACTTTGGCGTTTATGATGGCCATGGAGGCAAAGCAGTTTCTAAATTCTGTGCCAAGTATCTACACCAGCAGGTGCTGAAGAGTGAATCTTACCGAGCTGGAGATATAAGCACATCATTACAAAAATCTTTTCTTAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGGGAATTAGCTGTCTTGGGGGATAAAATAGAAAAGTTATCTGGTATGTTAGAAGGCTTTATTTGGTCTCCCAGGGGCAGTGAAGCAAATGAGAATGTCGATGATTGGGCATTTGAGGAGGGACCCCATTCTGATTTTACTGGACCAAACTCTGGAAGCACAGCTTGTGTAGCTGTTATCCGAGGAAACAAACTTGTAGTTGGTAATGCTGGAGATTCTAGATGCGTCTTGTCAAGGAAAGGCCAGGCACACAATTTATCTAAGGATCACAAGCCTGATCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGATATGGAGTTCAAGCAGAATAAGTATTTGCCTGCCGAAAAGCAGATCGTGACTGCTGATCCGGACGTAACTTCAGTTGAACTTTGTGATGATGACGAATTCCTTGTGATAGCCTGTGATGGAATATGGGATTGCATGTCTAGCCAACAGCTTGTGGACTTTATACATCAACAGTTAAAGACAGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACCGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAAACCTTCCAGCCCTGATGTTTCTGTCACGAACCAGCCCCAATCATCTGCTCAACCACCTGAAACCGATAAAAGTTCAGAGAAAAAAGTAGAATCGAAGTGA 1089 0.4435 MGIYLSAPKTEKASEDGENDKLRFGLSSMQGWRASMEDAHAAIPYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKSESYRAGDISTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRGSEANENVDDWAFEEGPHSDFTGPNSGSTACVAVIRGNKLVVGNAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHQQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKPSSPDVSVTNQPQSSAQPPETDKSSEKKVESK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01847 362 CDD PP2Cc 23 328 IPR001932 -
Vian7g01847 362 MobiDBLite consensus disorder prediction 332 350 - -
Vian7g01847 362 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Vian7g01847 362 MobiDBLite consensus disorder prediction 332 362 - -
Vian7g01847 362 PANTHER PROTEIN PHOSPHATASE 2C 17 327 IPR015655 GO:0004722|GO:0006470
Vian7g01847 362 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Vian7g01847 362 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Vian7g01847 362 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Vian7g01847 362 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Vian7g01847 362 Gene3D - 1 329 IPR036457 -
Vian7g01847 362 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01847 Vian-Chr7 29271807 29279076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01847 1 332 PP2C-type Phosphatase Gene Family AT2G25070 76.577 0.0 563