Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01842 ATGCTCACCAAAATTCATAGTAGGCTGCTGCAGCCAAAGGTATGGAGATTTCTGTGTTTTGTTTCATCGATTGTTGGACTTGTCTGTTATGCTTTGAGCTCTTCTTTCAATCATTTATGTGGCGCTTGGAAGTGGTGGAAGATCTTTTTGTATATTGGTTTTAGTTTCTTCATCTCCCTTTCCACCTTGTTTGCAAAGGCATGGGAGTGCTCCAACTCTCCCTGTTTGGAGGCTCACACGGCCTTCTTGGTTTTGCTGATAACTTCTGTGTACTCCTTTTTCTTCGATAAACAAGTCACAGAGAAACCAGATGCATATAGTCTGGTTTCGTATGCTGCATTTGCTATCATGTCACTAGGCTTGTCAAGACTCAGTCACTTCGGATTTGAGGTCGATCTTCTATATTTTTTCAGTGGATTTCTGACAGTACAACTCATGAAAATAAAATTATGGTTAGTAATTGTTGGACGGAGTTTCAGTTATTCCCTCATCATTCTTCGTTCGGCCTTGGATGCTTCAGCCACTGGGTATGTTGGACTCCATGTCAATGATGACGTAGTCATTGAAATTGATTCACACTCACAAGGAACAAGCCGCAATTTTTCACAAGTTGGTTCACCTCAAACTATTACCACTGTTGTTGGTAATTCCCTCGTCATGCCGCAAGGCGTTGTTGTCTCTGAAGGAGTTGAGGATTCAGGATTCATGGTCACTCAAGGCAAAAATGACAGTAAAAAAAGTATAATGGCACGATTCATGGAATGTATAGAGGTGCTTAAGAAGGAGAATGAGACCCTTATCGACACAATTTCAAAGCATGTAGATGGATATCTTAAAGCTAATGTGGCCAACAAGATTCCAACGGTGGAACTCCATGCTGACAACAACTTGGTGGTTGATGCATTGCCTGCTGGAATCATCAACGACCTTCACGAAGCCGTGTGGCTGATACTGGCTGAAGGGTTTGAGGAGGATTGTTGCAGAGCATACTATACTTGCCGAAGGGAGTTTCTGAAAAAGTGTTTATGGACTTTTGGGTTGCAAATGCAAGAGCTTTGCATGGAGGACATTGATAAGATGGACAAGATTCAGAGTTGGTTAACAAAGGTTTTGTATGTAGTTGATAGTGTACTCCTTCCCAATGAAAGGACACTCTGTGGTCGCGTTTTTAAAGGGGTCTCTTCCGCTGGGGATTTTACTTTCACTGTGGTTTGTAGAGAATTGAATATTTGTTTGGTTCGCATTGCCAATCACTTGGCAACTATTCTGGAGTGTGAAAATTTTACATATTATGAGGGTGGTGAGCTTCATCCTAACATCTGTGAATTGATGTACAAATTTCGTTATGTTTGCACACAAAGGGATAATAGATCTAGGCAAGGATTAGAAGAATACACCATGTTTGATAAGGAGGGAAAGCTTTTACCGTCTGTGAATGTGGCCAGGATAATAGCAGCAGCCCTGATAGAGAGAATTTTAGAAGTGGAGTCCAAAAATTACCATAACCCTTCTCTGGGATTTGTTTTCATCATGAACAATCTGAGTTTCATACAAGTAGGAGCAAAGTTCTATCGATTGGTTCCTATTTTTAGTCAAGATTGGCTCCGGAAATTCACAACAAAATTTCAACAAAACCTCGAACTCTATCTGAAAAGCTCGTGGAATAAGATTGTGGACTTTCTGAAGTTTGATATCTGTGAATCAGAGACTAGTGTTGCGGTTGGGTTACTGAAAGACAGGATAAATTCGTTCAACGAACACTTTGATGAGATATGCAATGTTCAGTCTACTTGGTTTGTGTTTGATGAAGACTTAAGAAAACATATTGTAAAATCCATAGAAAACATGTTGTTGCCAGCATATGGAAACTTCATTGGAAGGTTGCAGAATTTTCTTGGCAAACACAGTTATAATTATATTAAGTATGGAATGTTTGACGTCCAAGATCGAGTCCGCAATCTGTTTGTTGTTATGAAGAATAAGAATCTGTTTCTGAAACAGAAGTGA 2007 0.3991 MLTKIHSRLLQPKVWRFLCFVSSIVGLVCYALSSSFNHLCGAWKWWKIFLYIGFSFFISLSTLFAKAWECSNSPCLEAHTAFLVLLITSVYSFFFDKQVTEKPDAYSLVSYAAFAIMSLGLSRLSHFGFEVDLLYFFSGFLTVQLMKIKLWLVIVGRSFSYSLIILRSALDASATGYVGLHVNDDVVIEIDSHSQGTSRNFSQVGSPQTITTVVGNSLVMPQGVVVSEGVEDSGFMVTQGKNDSKKSIMARFMECIEVLKKENETLIDTISKHVDGYLKANVANKIPTVELHADNNLVVDALPAGIINDLHEAVWLILAEGFEEDCCRAYYTCRREFLKKCLWTFGLQMQELCMEDIDKMDKIQSWLTKVLYVVDSVLLPNERTLCGRVFKGVSSAGDFTFTVVCRELNICLVRIANHLATILECENFTYYEGGELHPNICELMYKFRYVCTQRDNRSRQGLEEYTMFDKEGKLLPSVNVARIIAAALIERILEVESKNYHNPSLGFVFIMNNLSFIQVGAKFYRLVPIFSQDWLRKFTTKFQQNLELYLKSSWNKIVDFLKFDICESETSVAVGLLKDRINSFNEHFDEICNVQSTWFVFDEDLRKHIVKSIENMLLPAYGNFIGRLQNFLGKHSYNYIKYGMFDVQDRVRNLFVVMKNKNLFLKQK 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01842 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 295 420 IPR004140 GO:0000145|GO:0006887
Vian7g01842 668 SUPERFAMILY Cullin repeat-like 274 655 IPR016159 -
Vian7g01842 668 Gene3D Exocyst complex component Exo70 236 426 - -
Vian7g01842 668 Gene3D Exocyst complex component Exo70 427 662 - -
Vian7g01842 668 Pfam Exo70 exocyst complex subunit 488 649 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01842 Vian-Chr7 29115602 29117608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01842 285 655 EXO70 exocyst subunit family AT5G58430 34.831 4.59e-66 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01842 - - var:108336660 1334.32