Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01838 ATGTCGATGGCCGGAACCTCTGCTTACCCCGTGTCCTTAAACACCAGTTTATGGGTTTGTGAACCTTCAACAAAGTTTCAAATTTATCCCAAAGGAATATTCTACGACGACAACCCTTTAAACTACACGCTAACGGTGGTCACTTTACAAGCCTGCTTAGCCTGTTTGTCCACCTCATGCTTAGAATTCCTTCTTGTCCCCCTCGGGGAGACTACCTTCATTCCCCAAGTGCTGGCAGGATTGCTAACGGGACCAACATTTTTGGGGAGAATTTTAAGCCTTAACAACTTGTTCTGCCAAAGACCTATCTATGTAACTCAGGCAATCTCTCTTTTCGGGATGACGATGTTTTTGTTCTTGATGGGAGTGAAAGTAGATCCACTTTTAGTTTTTAGAACAGGGAAAAAGACTTGGGCCATTGGCTTGTGTTCTTGTCTATTGCCACTCATCTTTAGCTTATGTCTTGCTTATATTCTAAGGCAATATTTGTCCCCGGATTTAGAAATCTACAAGTCTCTATATATTATGGCGGCTTTCTCATCAACTGGTTCCTTTCAAGCCACTACCAGTGCATTGCAAGATTTTAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCAATCTCTTCATCTATGATAAATGGAGCGCTCAGTTCGTTATGGCAAGGCATTTTACGCACACTATCTTCAAATTCTGTGCAGAAATACACAGACTTATCTTTATCATTGGGTTGCCTCTCTCTGATTTTGATGTTGCTTGTCATCCTGTGTATTTGTCGACCTATCATGTTATGGATGATACGCATGACGCCCAAAGGGGAACCTGTGAAAGAGTCCTACATAGTTTCCATTTATGTTATGGTGTTGGGCTGTTCACTCTTTAGTGAAATCATTGGGGAGCACTACCTGATTGGACCATTGATTCTTGGCCTGGCAGTGCCAGAAGGCCCACCTCTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGATCTCGGGACTGCTTTTGCCCTTGTTCTTCTTCTCTTCCAGTGCTATGTTCAAGATCGATCTAGTTCATCTCTATGACTTCACTGTTGTGCAACTTTTGGCCATAGCTAACTTCTTTGCCAAGCTTGCAGGAGCCGTGTTACCCTCACTCTACTGCAAGATACCACTCATTGATGCACTTGCCTTAGGCCTCATCCTCAATTCCCAAGGCATCACACAGTTGCTGAACTTGCAAAGTTTACACTACTTTCATACTTTAGATGATACATCCTACGCGCAAATGGTGATAGCTTTAATATGGTTGACAGCAGCTTCCAACCCTATAGTCAAATTCTTGTATGACCCATCTAAAAGTTACTTGTCTCTAACAAGGTGGAGAACCATTGAGCATTCTCCTCCCGGCATTGAACTTCCGATCATTGCATGCATACACTGTGAGGAAAACACTACATCCATGATTAATTTTCTTGAAATATCTAACTCTAGAGTTGAAAGTCCCATTTACTGCCATGTTCTACACCTGCTTAAACTGAAAGGTAGAACAGCCCCACTTTTGATAGATCATGAACTCAAGTGCAGCAGCAATCTATGGCGCACTAATCATTCATTGAACATAATAAATGCCTTTAAATCATATGAGCAACACAGCAGAAGCGTGAACGTGAAAGTCTACACTTGTGTCTCCCATTATGAGACAATGCACAATGAGATATGCATGCAGGCTGCAGAGAAAAGAGCATGCATATTAATCGCACCTTTTCACAAGCACTTTAGAACAACTGGGGTAATAGAATTAGCAAACCCCATTAGAGCACTGAATCGCCATTTGCTGAGAACCGCACCTTGTTCCGTTGGGATCTTAGTTGAACGTGGGAGTTTTGTTAGCAACAACCCTCTAACAACTACATCCTTTTATAATGTTGCAGTTGTATTTATAGAAGGGCCAGATGACCGTGAAGCCTTGGCATATGCAATGCGAATGGCAGATCACCCCAATGTAAAGGTCACTGTAATTAGGATAACGAAAACTCGCAGGAAAAGTAGAACTCCGATGAGAGATCCTGATGCTGAAATAGTTCACAAGTTTATGAGCAGCTACCTCCGAATGAAACGACATGATTTCAAAGAGCAAGTTGTGAGAGATAGTCTTGAAATGGTTGGTGTCATTAAGGAACTCGAAGGTTGCTTTGATTTGATTTTGGTTGGTAGACGCCACGAGAGTGAGTCTTCAATGTTCTATGGAATGAATGAGTGGATTGAGTACCCAGAACTTGGGTCTGTAGCAGACATGTTGGTGTCTTCAGATTCTACCTTTGACGGCTCAGTTTTGGTGGTGCAACAACAAAATAAGGAAGGGTCAAAGGTTGGTTGTCAAGATTATTACAATAAAGAAAATTCTGTCACCAAGAGTGAATTACCAAATGTTTTGGATGTGCATCCTGATACAAAGCTGTGGCCAGTTGTCTAA 2454 0.4214 MSMAGTSAYPVSLNTSLWVCEPSTKFQIYPKGIFYDDNPLNYTLTVVTLQACLACLSTSCLEFLLVPLGETTFIPQVLAGLLTGPTFLGRILSLNNLFCQRPIYVTQAISLFGMTMFLFLMGVKVDPLLVFRTGKKTWAIGLCSCLLPLIFSLCLAYILRQYLSPDLEIYKSLYIMAAFSSTGSFQATTSALQDFKLLNSEVGRLAISSSMINGALSSLWQGILRTLSSNSVQKYTDLSLSLGCLSLILMLLVILCICRPIMLWMIRMTPKGEPVKESYIVSIYVMVLGCSLFSEIIGEHYLIGPLILGLAVPEGPPLGSALVERLDTLISGLLLPLFFFSSSAMFKIDLVHLYDFTVVQLLAIANFFAKLAGAVLPSLYCKIPLIDALALGLILNSQGITQLLNLQSLHYFHTLDDTSYAQMVIALIWLTAASNPIVKFLYDPSKSYLSLTRWRTIEHSPPGIELPIIACIHCEENTTSMINFLEISNSRVESPIYCHVLHLLKLKGRTAPLLIDHELKCSSNLWRTNHSLNIINAFKSYEQHSRSVNVKVYTCVSHYETMHNEICMQAAEKRACILIAPFHKHFRTTGVIELANPIRALNRHLLRTAPCSVGILVERGSFVSNNPLTTTSFYNVAVVFIEGPDDREALAYAMRMADHPNVKVTVIRITKTRRKSRTPMRDPDAEIVHKFMSSYLRMKRHDFKEQVVRDSLEMVGVIKELEGCFDLILVGRRHESESSMFYGMNEWIEYPELGSVADMLVSSDSTFDGSVLVVQQQNKEGSKVGCQDYYNKENSVTKSELPNVLDVHPDTKLWPVV 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01838 817 PANTHER CATION/H + ANTIPORTER 28 778 - -
Vian7g01838 817 Pfam Sodium/hydrogen exchanger family 73 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian7g01838 817 CDD USP_Like 635 774 - -
Vian7g01838 817 Gene3D - 519 780 - -
Vian7g01838 817 Gene3D - 45 447 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01838 Vian-Chr7 29021430 29024316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01838 5 776 Antiporter Super Family AT2G13620 34.207 5.92e-136 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01838 K26731 - gmx:100790969 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01838 7 29021430 29024316 Vian7g01838 7 29021430 29024316 ECH