Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01827 ATGTCGTTTTGGGATTATGCTGGCTGTGACCGGAAAGTTAATCACTTATTTAATGATGCAATGAAGAATGACGCTCGATTGATCTCTAGTTTGATGATTGAGAAGTGCAAGGGAACGTTCACTGGATTGGAGTCATTGGTTGATGTTGGAGGAGGCACAGGGACCATGGCAAAGGCCATTGCAAAATCATTCCCAAAGATGCAATGCATTGTATTAGATCTCCCTCATGTTGTTGCTGGCTTGCAAGGTGTTGAAAACCTAAAATACTTTGGAGGGGACATGTTTGAGGCTATTCCTCCAGCTGATGTCATTCTGTTGAAGGGCTGCGTGAATATGATGAAGAACAAACGGATATGGAGAAAAAAGAAGCAAGAGTTGCAAGATGAGAAAGGATCTGGAGTTGGGGGGTGCAAATCTGGAGAGAGAAAGAGAGAAGGAGAGTTGGGAGGTGTGATTGCGGGAGTGAAAATGGGTAAAAATTTAGAGTTTAAGATTAAAGTAAATAAAGAGGGATAA 516 0.4205 MSFWDYAGCDRKVNHLFNDAMKNDARLISSLMIEKCKGTFTGLESLVDVGGGTGTMAKAIAKSFPKMQCIVLDLPHVVAGLQGVENLKYFGGDMFEAIPPADVILLKGCVNMMKNKRIWRKKKQELQDEKGSGVGGCKSGERKREGELGGVIAGVKMGKNLEFKIKVNKEG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01827 171 Coils Coil 109 129 - -
Vian7g01827 171 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 171 IPR016461 GO:0008168
Vian7g01827 171 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 116 IPR029063 -
Vian7g01827 171 Gene3D Vaccinia Virus protein VP39 1 131 IPR029063 -
Vian7g01827 171 PANTHER O-METHYLTRANSFERASE 4 115 IPR016461 GO:0008168
Vian7g01827 171 Pfam O-methyltransferase domain 1 108 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01827 Vian-Chr7 28792061 28795235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01827 1 115 Monolignol Biosynthesis Gene Families AT5G54160 37.903 1.25e-21 88.2