Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01819 ATGCCTTCAACTGCCTTTCAATGGCTGAGTCTTGTGGGCATCATTTGGCTCCAATCCATAACAGGAACAAACACCAATTTCCCTGCTTACTCATCACAGCTAAAACAGCTTCTTTCCATCTCTCAGTTTCAGCTCAATAACCTTGCTTTTGCCTCTGATGCTGGCAAACTATTTGGTTTTTTATCTGGCCTGGCTTCTATTTACTTACCCCTTTGGCTTGTACTCATGATTGGTTCAACTCTTGGACTGGTTGGCTATGGTGTACAATATCTCTTCATTACAAACCATATCTCCTCTCTCTCCTATTGGCATGTCTTCTTTCTTACTGTTTTAGCAGGAAACAGCATTTGTTGGATTAATACTGTCTGCTATGTCATCGCCATAAGGAACTTTCCATCTGATCGCCAAGTTGCTGTGGGGATAACAACTAGTTACCAAGGGTTAAGTGCTAAGGTTTATACCACCATTGTTGATGTTGCAGGACACAAAAAAAGAGCCATAGCCTTTCTCTTTCTGAACTCAGTCTTGCCTTTGCTAGTTAGCCTGATAACAACTCCTGTGATTAGAGAAATTGAAGTCACAAGTCCTAAACACAGTAGGGTTGGATTTGATGTCATCTTTGCCATAACAATTGCCACTGGAATTTATGCTGTCATGAGCAGTTTGGAGTTTGTCTCAAACAAAATATCTTCACTGGGTAGCCTTATTGGTATTCTAGTGTCCCTTCTCATGCCTATGTTAGTTCCACTTTCCATGATGATAGTAGGGTCATGGCACAAAAATACAGAAAAACAAAGAGTCTATAATTTCACTACAGAAGCTGGTCATGACGAGAGAACGGAAAATGAAGTGAAAGAGGATGAAGAAAGTGAAGAAGTTCATGATGTAGGTGTAAGAGAAGAAGTAGAAACCAAGTTAATGTTGAGAAGACTTGATTTCTGGTTATACTTCTTCGTGTATTTGTTTGGTGCAACACTGGGTTTGGTGTTTCTGAATAACTTGGGGCAAATAGCCGAATCCCGAGGCTATTCTGGAACTTCATCGTTGGTGTCTTTGTCTTCTTCTTTTGGATTCTTTGGACGTCTCATGCCATCTATAATAGATTACTTTTACAGGGACAACAGGTGTGCAATATCAAAACCAGGTTATATGATGGTATTAATGGCTCCAATTGCTGGGGCGTTTTTCTTACTGCTGAACAAGACTCACCTTGCCTTGTATGTTAGCACTGCCATAATTGGAGTGTGTAATGGTGCAATAACTTCAATTGCTGTGTCGACGACCACTGAACTATTTGGAACCAAGAATTTCTCAGTGAACCATAATGTGGTGGTAGCCAACATTCCTGTGGGGTCCCTTTTGTTTGGATACTTGGCTGCTATTGTTTATCATAAGGGAGGGAATGAAAATGGAAAATGCATGGGCATGGAATGCTACAGGAACACTTTCATCATATGGGGACCGGGGAAGAAGTTGTGGTTTTACTTGCATAAACATTAA 1500 0.4067 MPSTAFQWLSLVGIIWLQSITGTNTNFPAYSSQLKQLLSISQFQLNNLAFASDAGKLFGFLSGLASIYLPLWLVLMIGSTLGLVGYGVQYLFITNHISSLSYWHVFFLTVLAGNSICWINTVCYVIAIRNFPSDRQVAVGITTSYQGLSAKVYTTIVDVAGHKKRAIAFLFLNSVLPLLVSLITTPVIREIEVTSPKHSRVGFDVIFAITIATGIYAVMSSLEFVSNKISSLGSLIGILVSLLMPMLVPLSMMIVGSWHKNTEKQRVYNFTTEAGHDERTENEVKEDEESEEVHDVGVREEVETKLMLRRLDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSGTSSLVSLSSSFGFFGRLMPSIIDYFYRDNRCAISKPGYMMVLMAPIAGAFFLLLNKTHLALYVSTAIIGVCNGAITSIAVSTTTELFGTKNFSVNHNVVVANIPVGSLLFGYLAAIVYHKGGNENGKCMGMECYRNTFIIWGPGKKLWFYLHKH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01819 499 Pfam Nodulin-like 7 249 IPR010658 -
Vian7g01819 499 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 487 - -
Vian7g01819 499 SUPERFAMILY MFS general substrate transporter 11 467 IPR036259 -
Vian7g01819 499 Gene3D MFS general substrate transporter like domains 7 471 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01819 Vian-Chr7 28624330 28628106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01819 1 487 Nodulin-like Gene Family AT2G30300 48.290 8.24e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01819 - - gmx:100808034 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01819 7 28624330 28628106 Vian7g01819 7 28624330 28628106 ECH