Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01809 ATGATTTTAATATACCGTGGAATAAGTGGCCAAGATTATGAGAAGTTACCATTTGGATATTTTGATAGAAATGGAGAATTTGTTGAGAGTTCTATAACAGCAAACAAGAGAATTGATGCTGGTGGGAATATACTTGGCTGTTTTTGCTTCTTGCAGGTTGTAATGCCAGATCTGAATCAGTTCTCTGAAGAACACAAGCCAATAGGCAGAGAAAACATTTCTGAATCCAAAGAGTTAGCTTATATACTACAAGAGATTGAAACCATGACTCTGACTTGGAGCTTGAGCCAAGCGGAATTTGTGGAGGGGGAGACAGAAGAGGGTGACTTAACTCCCAATAAAGAGGGACCTGCAGAGGGGAGAGAACTGCTAGAAACATTGAAAGACATCAAAGATCATCTTCTCCGGACTTATAGTTTTGGAAAAGAGGTGACCAGAATGTGGGAAGTCAATAGAATCGAAGAAGAATGGAAGACATTGGAGGAGGATTTGCCACCACCCAAGCCTCCAGACCAGAATTTGGAGGGTGCCACCTGA 537 0.4171 MILIYRGISGQDYEKLPFGYFDRNGEFVESSITANKRIDAGGNILGCFCFLQVVMPDLNQFSEEHKPIGRENISESKELAYILQEIETMTLTWSLSQAEFVEGETEEGDLTPNKEGPAEGRELLETLKDIKDHLLRTYSFGKEVTRMWEVNRIEEEWKTLEEDLPPPKPPDQNLEGAT 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01809 178 MobiDBLite consensus disorder prediction 159 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01809 Vian-Chr7 28489899 28490435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01809 1 126 Histidine Kinase Gene Family AT2G18790 39.683 8.44e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01809 K12123 - gmx:100808192 154.836