Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01795 ATGTTGGACATGTTTGCGGCTGGCACTGATACATCATCTGCAGTTATAGAATGGGCCATGTCAGAGATGTTGGAAAACCCAAAAGTAATGAACACAGCTCGAGAAGAAGTTAGAAGAGTTTGTGGTAGCAAAGGATACATGAATGAAGAATCACTTGAAGAACTAAAATATCTGAAAGCAGTAATAAAAGAAACACTGAGATTGCACACTCCCGGCCCTCTTCTTCTTCCAAGGGAATGTAGAGAAAGTTGTGAGGTGAAAGGGTATACAATACCTGCTGGGACCAAAGTGATGGTAAATGCATGGGCAATTGGAAGAGACCCTGATTATTGGAATGATCCAGACAAGTTTTATCCTGAGAGATTCATGAACAGTCAAATCGATTATAAAGGGTCCCATCATGAATTCATACCCTTTGGTGCTGGAAGGAGAATGTGTCCTGGCATGTCTTTTGGGACAAATATCATTGAACTTTGTCTTGCACAACTACTTTACTATTTTAATTGGGAACTTCCAAATGGAAACAAGGAAAACTTGGAAATGACTGAAGCTTTGGGAGCCTTCTCAAGAAGAAAAACGGATTTAGTCTTAGTTCCCATTTCTTACAATCCTCTTCCTATTTCGTCAAACCTTAAATTCTAA 642 0.3941 MLDMFAAGTDTSSAVIEWAMSEMLENPKVMNTAREEVRRVCGSKGYMNEESLEELKYLKAVIKETLRLHTPGPLLLPRECRESCEVKGYTIPAGTKVMVNAWAIGRDPDYWNDPDKFYPERFMNSQIDYKGSHHEFIPFGAGRRMCPGMSFGTNIIELCLAQLLYYFNWELPNGNKENLEMTEALGAFSRRKTDLVLVPISYNPLPISSNLKF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01795 213 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Vian7g01795 213 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 Gene3D Cytochrome P450 1 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 SUPERFAMILY Cytochrome P450 2 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PANTHER OS08G0105600 PROTEIN 1 204 - -
Vian7g01795 213 FunFam Predicted protein 5 197 - -
Vian7g01795 213 PRINTS P450 superfamily signature 7 24 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS P450 superfamily signature 60 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian7g01795 213 Pfam Cytochrome P450 2 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01795 Vian-Chr7 28275777 28276696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01795 1 200 Cytochrome P450 AT2G45550 49.751 1.58e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01795 - K23807 gmx:100779851 354.755