Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01790 ATGGGGAACAACAGGTTTAAGCTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGAAAGAGAAATGGTTCTCATGTAATGAAGAGTAAAGTATCTTCACCAACAACATCTCAAAGGTCGGTGCCAAGATATTCACACTATTTCTCCTCTGAGCCGATCAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAGAGACTTGGACATGCCATTCACTGATTCACCTAGAACGTCATCCAAGAGAAGGACTAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTTGTTTCTTCGTCTTTCATACCAACTTCCAACTATGATTCCACCAATCATTGGATCAAACCATACCAAGATCAGTCACCAGATTACGATGTGTCTTCAGTTGAAAGCTCTTCTGAATCTGATCTCCATGAATATGCTTATTCTGAGTCTGAATGTGACAGCTTTTCTGTTCCTGATTTACTTAATGGAATGGCCCCTAATGGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAACGACTCCTTCCTTGGGAACTCTGAAAACCAAGATAGGTTTGATGCAATTTCGCTGCTGGGTCTTGCTCCAATATTGACAAAGCCAGTGAAGTTTGATGACAAGGTCATTGAAGCCACTGAGTTGAGAAGTTCAACTGAATGGGATGAGCTGCAGGATGATCAGTCTTTCTCAATTGAAATTAACAGAGAGGAAGGAAACAGAACTCAAAGGAGGAGAAAAAGCAGTCACAGAAAGCCCTTCGCTAATTCTCCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTGTCATCCACTGCAAGCAGAGTTTCAAGGGGCACAGGCTTTCCTGATGGTTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAATCAATGGTGGAGATGATTGTGGAGAACAATATCCGAGCATCCAAAGATTTGGAGGACCTACTTGCCTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTAGCTCAACTTAGAATGTAA 1143 0.4191 MGNNRFKLSDMMPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSVPRYSHYFSSEPIRAGKLYNTPIHTRDLDMPFTDSPRTSSKRRTRRKTIYKPSPTVVSSSFIPTSNYDSTNHWIKPYQDQSPDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGMAPNGSCRVSSSTNDIIIDMNNDSFLGNSENQDRFDAISLLGLAPILTKPVKFDDKVIEATELRSSTEWDELQDDQSFSIEINREEGNRTQRRRKSSHRKPFANSPGIRLRINSPKLASRKIQACARRSVSSTASRVSRGTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLRM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01790 380 MobiDBLite consensus disorder prediction 246 272 - -
Vian7g01790 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 108 376 IPR038933 GO:0045892
Vian7g01790 380 NCBIfam uncharacterized plant-specific domain TIGR01568 313 376 IPR006458 -
Vian7g01790 380 MobiDBLite consensus disorder prediction 35 53 - -
Vian7g01790 380 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Vian7g01790 380 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Vian7g01790 380 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
Vian7g01790 380 MobiDBLite consensus disorder prediction 72 97 - -
Vian7g01790 380 MobiDBLite consensus disorder prediction 27 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01790 Vian-Chr7 28132875 28134017 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian7g01790 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01790 - - gmx:100780926 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00706 6 23890879 23892024 Vian7g01790 7 28132875 28134017 PCT