Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01789 ATGGCAGAACATTGTTATGTGGAAACCGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGAATTGAGGTAGCATGGAACCAAGTGAGACTCAACGAGGCTCTTCGCACTCCTGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCATCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGGCCTTCAACTTTATCACAGAATTGTTCACATCAGGATACAGGAAGAAATATGAGCGTGTTAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTTATACACAGGGACCTTAAATGTGATAACATATTCGTTAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTAGGACTTGCTGCAATTCTTCGTGGATCCCAATCAGCACACAGTGTCATAGGTACCCCTGAGTTCATGGCACCAGAGTTGTACGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCGGAATATCCATATAGTGAATGTTCTAATCCAGCCCAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTTCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCAGAAAAGAGGCCTTCGGCAAAAGAATTGTTGCTTGACTCGTTTCTTGCATCTGATGATCCATCATCAACAACGAAATTTCCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTGCAATTAAATGATGATCTTCCGAGGACTGGAATGAAAGTGATAGGAAAACTGAATCCTCAAGATAATACTATCTTTCTCAAAGTACAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACCCCTATTGATGTCGCAACTGAAATGGTGAAAGAGTTGGAGATTTCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTCAGAAGAGGCAAACTAGCTGTTCAGATGCCTTTCACACATTCAGTTATATAGATGATGATGATTGTGATGATAATGATGCACCTCATCATCATTTTCGCTCCTTCTCTTCAAGTTCATCATTCCAAGAATCTATGCCAGATTTTGTCAGTAATGCTGAGGAAATATCAACTGGATATTATTGGCTCCATGATGATTCGCATGATGATACCAGTTCACGATGCTCTTCACAGGGGACATATTCCAACCTGAATTACTCTTCTGTGGATGATCATCAGGATCAGTACAATATGCCTTCTTTGAGAAAAGATAAACTTCCCATCATGAAGAGTCACAGCAAGGGCAAAAAGGCTTCCCCTGGCGAAGACTTGAGCAATTTCAACCAATGTAAACTCATGGCAGGATCACAGGTTCCTTTTAATAGTAAAAGTAAGATGATGATGAACAATCAAAGATTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAACTATTACACCGATCACTGGTTGAGGAGGTCAACAAAAGAAGGTTGTTCAAGACTGTTGGTGCTGTAGAAAATATTGGATTTCAGGCACCTTGTGATGTTACAACAAAAAGGTCACATCATGTATCTGCTGCTAGGAATGAGAACTGTTCAAGGAGGGGCAAGGGGGAAAAAAATAAGAGATGA 1818 0.4026 MAEHCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRAFNFITELFTSGYRKKYERVSIQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKELLLDSFLASDDPSSTTKFPIQKPFLNATEMEKLQLNDDLPRTGMKVIGKLNPQDNTIFLKVQISDKNGSVRNVFFPFDIFNDTPIDVATEMVKELEISDWEPFEIANMIDREISALLPQKRQTSCSDAFHTFSYIDDDDCDDNDAPHHHFRSFSSSSSFQESMPDFVSNAEEISTGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNMPSLRKDKLPIMKSHSKGKKASPGEDLSNFNQCKLMAGSQVPFNSKSKMMMNNQRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSHHVSAARNENCSRRGKGEKNKR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01789 605 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Vian7g01789 605 MobiDBLite consensus disorder prediction 583 605 - -
Vian7g01789 605 SUPERFAMILY Protein kinase-like (PK-like) 17 306 IPR011009 -
Vian7g01789 605 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01789 605 Pfam Protein kinase domain 20 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01789 605 CDD STKc_WNK 14 270 - -
Vian7g01789 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Vian7g01789 605 MobiDBLite consensus disorder prediction 580 605 - -
Vian7g01789 605 MobiDBLite consensus disorder prediction 466 506 - -
Vian7g01789 605 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 580 - -
Vian7g01789 605 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01789 605 Gene3D Transferase(Phosphotransferase) domain 1 100 276 - -
Vian7g01789 605 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Vian7g01789 605 FunFam probable serine/threonine-protein kinase WNK9 97 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01789 Vian-Chr7 28126845 28130442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01789 6 581 MAP Kinase Kinase Kinase AT5G58350 59.418 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian7g01789 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01789 K08867 - gmx:100272203 1035.02