Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01781 ATGGAGCTCGATGTTTGCATGAATGGTGCTTGCAAGAATGGCTATGCGAGAGAGTGGAAGAAAGGGTGGCCTCTGCGATCGGGTGGATTCGCTAGGCTCTGCGATAAGTGCGGATCTGCATATGCCAATTCAATTTTCTGTGAAAAATTCCACCTGCATCAAACTGGTTGGAGAGAGTGCAACTTTTGCAACAAGTCTATCCACTGTGGATGCATAATATCAAGGTTTTCTTTTGAGTACCTTGATTTTGGAGGTATAGGTTGTTCAACCTGTTTGAGGGCTTCTCCATTTCCTTTGATACAGGAGACTGGAAACTCTATTAGGTCTATTAGATCAGTAAAAAATCATGCTAGTGATCGTCATACAGAACATATTGATGATAGGCTATTCCTTGATGGTTCTAGCAAAAGAAAACCTATGCACATGCGTAGAATTGTGGATGGTAGAGAATCCAGCCGTTGGCCTCAAGTTAAGAGAGATGACATACATTCCTGTATTGATCTAAGCAGAGAAGAAATGAGATTTTCAAATGTGATGAAACCGTCTAATCATTCATTAAAGTTTACTGCATTAGAAAATAACAGACCAACATGGGAGAATAGAAGTATGCACAGATCAAGTTCATTGAATATTTCTCTGGGAGCCTCATCAGGAAACCCTGTGCTACCTTCTGCTTCAGCGGTTGCAGCAGAAGGGAGATTTGATGGTAAAACATCATCTTCTTCCTTTCATCAAGGGCAAAGATCTCTCTCCATTATGCCTAAACCATTGATGAATGCAATAAACATAAATATGGAATCAAGCAATGGAATGATTTCTCAAGAGCGTGTTGCACGGCCACCTACTGATGGGAAAGGCAAGAATATGTTACTTTCTCGATACTGGCCAAGGATTACAGACCAAGAGCTTCAGCAATTATCCGGAGATTTGAAGTCTACTATAGTGCCTTTATTTGAGAAGGTACTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTGCCAAAATCATGCGCTGAGGCTTACTTTCCTCCTATTTCACAATCAGAAGGTCTTCCTTTGCATATGAAAGATGTGAAGGGCAATGAGTGGACATTTCAGTTTAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTAGAGGGAGTAACCCCATGCATACAGGCCTTGCAATTAAATGCTGGCGACATTGTGATATTTAGTCGAATAGATCCTGGAGGCAAATTTGTTTTGGGTTTTAGAAGGGCATCAGATTCTACAGATACACAGGATGCTTCTGCCGCTCATTCCAATGTTTTATCGACAAAGGAAACAACCTTTTCTGGTGCAACTGCAGGCAATAGTTATCATGATCTTCTCCAGACAAGGAAAGGGAATGGTGATCCTTACTTAAATAAATGTTCAGAGCATTTCCGTTTGGGTACTGCTGGCATTGCTGAGCGTCTTCGAACTGAAAATTCTGAGATTGTAAACAAAGATTTGGTGCAACTACCAATTTCAGTTTCAGAGAAGACTCAAAATATTGGACCTATGTGCAAGAGGTTGCTCATACACAATGAAGATGCCATGGAGTTGAGAGTTACATGGGAAGAAGCTCAGGACTTGCTTTGTCCAGCGCCTAGTATCAAGTCCAATATTGTAACAGTTGAGGACCAAGAATTTGAGGAATATGAGGAACCCCCGGTCTTTGGGAAGAGAACTACAATAAATGCTCGTTCATCTGGGTCTTTGAGCTTTGCATCAGAGGAAATGAGTCCAAAGGAATTAGATAATATTCCAGTTATCAGAAAAGATTCTAAAGTTGTAAAGCTCCTGCATTTTGTGAACATTGAAATAATAGGAGTTTTGGAAGATGATGTTGCTGACCGTGGTGATTCATCAGCTGGAGCCACCACCAAATATCCAAGGCACCGTTCAGGATGCACTTGCATTGTGTGCATTCAAGCCTCAAGTGGAAAAGGGAGACATAGCCCTCCCTGCATCACCGTGGAACGCCGTTTGGACACCCTTCTGACGCGTAAGAAGCAACGCCTTGGTACCCAGAAAGATGAAGATGAAGGAGATGGTGCATGTCTCTCTGAGAAAGAGGGAAACATAAACAAAGGTTGTCTTAAGAAGGGTGAACTCAGTGCAGGACAGATAGACCTGAATTGTCGTCCCAATCTCGATGAAGACATGCAAGTGGATATATGA 2199 0.4197 MELDVCMNGACKNGYAREWKKGWPLRSGGFARLCDKCGSAYANSIFCEKFHLHQTGWRECNFCNKSIHCGCIISRFSFEYLDFGGIGCSTCLRASPFPLIQETGNSIRSIRSVKNHASDRHTEHIDDRLFLDGSSKRKPMHMRRIVDGRESSRWPQVKRDDIHSCIDLSREEMRFSNVMKPSNHSLKFTALENNRPTWENRSMHRSSSLNISLGASSGNPVLPSASAVAAEGRFDGKTSSSSFHQGQRSLSIMPKPLMNAININMESSNGMISQERVARPPTDGKGKNMLLSRYWPRITDQELQQLSGDLKSTIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLHMKDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQALQLNAGDIVIFSRIDPGGKFVLGFRRASDSTDTQDASAAHSNVLSTKETTFSGATAGNSYHDLLQTRKGNGDPYLNKCSEHFRLGTAGIAERLRTENSEIVNKDLVQLPISVSEKTQNIGPMCKRLLIHNEDAMELRVTWEEAQDLLCPAPSIKSNIVTVEDQEFEEYEEPPVFGKRTTINARSSGSLSFASEEMSPKELDNIPVIRKDSKVVKLLHFVNIEIIGVLEDDVADRGDSSAGATTKYPRHRSGCTCIVCIQASSGKGRHSPPCITVERRLDTLLTRKKQRLGTQKDEDEGDGACLSEKEGNINKGCLKKGELSAGQIDLNCRPNLDEDMQVDI 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01781 732 ProSiteProfiles B3 DNA-binding domain profile. 318 419 IPR003340 GO:0003677
Vian7g01781 732 FunFam B3 domain-containing transcription repressor VAL1 296 423 - -
Vian7g01781 732 SMART B3_2 318 419 IPR003340 GO:0003677
Vian7g01781 732 CDD B3_DNA 316 417 IPR003340 GO:0003677
Vian7g01781 732 SUPERFAMILY DNA-binding pseudobarrel domain 315 417 IPR015300 -
Vian7g01781 732 Gene3D - 296 423 IPR015300 -
Vian7g01781 732 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 729 - -
Vian7g01781 732 Pfam B3 DNA binding domain 318 418 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01781 Vian-Chr7 27990033 27996742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01781 3 722 B3 DNA Binding Superfamily AT4G32010 40.537 4.75e-173 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vian7g01781 B3 4.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01781 K09287 - vra:106763363 1340.1