Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian7g01774 | ATGTCCGTACACTCAACACTGAACCTCCACCCCATCAACCCCGCCACTCCAAATTCCAATTTTGATGATAACCCACCATGCAAAACCAAGACCAAAACCCAAAGGAGGCTCCTTCGGATCATAATCACCGACCACGACGCCACTGATTCTGACTCCGACGACGAACAACGACAAAACAATCCAACAACGAGGAAAGTGAAGAGAGAAATTACCCAAATCAGCATGCACCTTCCTCTCCCGGACAACTCCCTTTCTTCTTGTTCGTATTCTTCTGGTTTAGCTTCTGCTTCCTCTTGTTCCTCCGAACAAGTCTCAAAGTGCAGAAGGCCCAAAAAACCTCCACCACCCTCCGAAGCGGCCCGCCGCCGCAGCAAGTTCCGCGGCGTCCGTCAGCGGCCGTGGGGGCGATGGGCCGCCGAGATCCGCGACCCGACCCGCCGGAAACGCCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCCGCCACAGAGTACGACAAAGCCGCCGTCAAACTCAAGGGTCCCAACGCCGTCACCAATTTCCCCCTCACAAGGCCGCCCCCGGTGGAGTCTCCTTTCGCCGCCATCGACAGCCTCAGCACCGACGGCGGCGCGTCGTACTCCGACTTGGTGGCCTCGCCGACGTCCGTTTTGACCTACGACTGCGACTCGACGCCGTTCGACAGTTACCATTACGGCGACGTGGACGCGCTCGGGTTCCACATCGACGCGCCGTTAAGTCTGGCGGACGTTGACGTCTCGCTTACGTGTCATCCATATAAGGAGGAGGAAGAGGCGTTCGATGAATTCGATCTCGACGAGTTCATGAATGTGGAAGTTGAAATTCCTAATGTGCCCCTCTCGGTGTTGGAGTTTGAAATTTTGTCGTACTCATTGGATCTTTGGAAGAGTGTAGAGTTGTAG | 924 | 0.5595 | MSVHSTLNLHPINPATPNSNFDDNPPCKTKTKTQRRLLRIIITDHDATDSDSDDEQRQNNPTTRKVKREITQISMHLPLPDNSLSSCSYSSGLASASSCSSEQVSKCRRPKKPPPPSEAARRRSKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTFDTAEEAATEYDKAAVKLKGPNAVTNFPLTRPPPVESPFAAIDSLSTDGGASYSDLVASPTSVLTYDCDSTPFDSYHYGDVDALGFHIDAPLSLADVDVSLTCHPYKEEEEAFDEFDLDEFMNVEVEIPNVPLSVLEFEILSYSLDLWKSVEL | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian7g01774 | 307 | Gene3D | AP2/ERF domain | 124 | 184 | IPR036955 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | SUPERFAMILY | DNA-binding domain | 124 | 183 | IPR016177 | GO:0003677 | |
Vian7g01774 | 307 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Vian7g01774 | 307 | MobiDBLite | consensus disorder prediction | 105 | 124 | - | - | |
Vian7g01774 | 307 | Pfam | AP2 domain | 124 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | ProSiteProfiles | AP2/ERF domain profile. | 125 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | CDD | AP2 | 124 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | PIRSF | PTI6 | 7 | 280 | IPR017392 | GO:0003700 | |
Vian7g01774 | 307 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 35 | 194 | - | - | |
Vian7g01774 | 307 | FunFam | Ethylene-responsive transcription factor 2 | 124 | 183 | - | - | |
Vian7g01774 | 307 | SMART | rav1_2 | 125 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | PRINTS | Ethylene responsive element binding protein signature | 148 | 164 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | PRINTS | Ethylene responsive element binding protein signature | 126 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Vian7g01774 | 307 | MobiDBLite | consensus disorder prediction | 99 | 127 | - | - | |
Vian7g01774 | 307 | MobiDBLite | consensus disorder prediction | 37 | 64 | - | - | |
Vian7g01774 | 307 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian7g01774 | Vian-Chr7 | 27820407 | 27821393 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian7g01774 | 28 | 229 | AP2-EREBP Transcription Factor Family | AT4G27950 | 42.584 | 7.12e-39 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Vian7g01774 | AP2 | 1.7e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian7g01774 | K13434 | - | gmx:100817278 | 362.459 |