Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01774 ATGTCCGTACACTCAACACTGAACCTCCACCCCATCAACCCCGCCACTCCAAATTCCAATTTTGATGATAACCCACCATGCAAAACCAAGACCAAAACCCAAAGGAGGCTCCTTCGGATCATAATCACCGACCACGACGCCACTGATTCTGACTCCGACGACGAACAACGACAAAACAATCCAACAACGAGGAAAGTGAAGAGAGAAATTACCCAAATCAGCATGCACCTTCCTCTCCCGGACAACTCCCTTTCTTCTTGTTCGTATTCTTCTGGTTTAGCTTCTGCTTCCTCTTGTTCCTCCGAACAAGTCTCAAAGTGCAGAAGGCCCAAAAAACCTCCACCACCCTCCGAAGCGGCCCGCCGCCGCAGCAAGTTCCGCGGCGTCCGTCAGCGGCCGTGGGGGCGATGGGCCGCCGAGATCCGCGACCCGACCCGCCGGAAACGCCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCCGCCACAGAGTACGACAAAGCCGCCGTCAAACTCAAGGGTCCCAACGCCGTCACCAATTTCCCCCTCACAAGGCCGCCCCCGGTGGAGTCTCCTTTCGCCGCCATCGACAGCCTCAGCACCGACGGCGGCGCGTCGTACTCCGACTTGGTGGCCTCGCCGACGTCCGTTTTGACCTACGACTGCGACTCGACGCCGTTCGACAGTTACCATTACGGCGACGTGGACGCGCTCGGGTTCCACATCGACGCGCCGTTAAGTCTGGCGGACGTTGACGTCTCGCTTACGTGTCATCCATATAAGGAGGAGGAAGAGGCGTTCGATGAATTCGATCTCGACGAGTTCATGAATGTGGAAGTTGAAATTCCTAATGTGCCCCTCTCGGTGTTGGAGTTTGAAATTTTGTCGTACTCATTGGATCTTTGGAAGAGTGTAGAGTTGTAG 924 0.5595 MSVHSTLNLHPINPATPNSNFDDNPPCKTKTKTQRRLLRIIITDHDATDSDSDDEQRQNNPTTRKVKREITQISMHLPLPDNSLSSCSYSSGLASASSCSSEQVSKCRRPKKPPPPSEAARRRSKFRGVRQRPWGRWAAEIRDPTRRKRLWLGTFDTAEEAATEYDKAAVKLKGPNAVTNFPLTRPPPVESPFAAIDSLSTDGGASYSDLVASPTSVLTYDCDSTPFDSYHYGDVDALGFHIDAPLSLADVDVSLTCHPYKEEEEAFDEFDLDEFMNVEVEIPNVPLSVLEFEILSYSLDLWKSVEL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01774 307 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Vian7g01774 307 SUPERFAMILY DNA-binding domain 124 183 IPR016177 GO:0003677
Vian7g01774 307 MobiDBLite consensus disorder prediction 1 27 - -
Vian7g01774 307 MobiDBLite consensus disorder prediction 105 124 - -
Vian7g01774 307 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 CDD AP2 124 182 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 PIRSF PTI6 7 280 IPR017392 GO:0003700
Vian7g01774 307 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 194 - -
Vian7g01774 307 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Vian7g01774 307 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Vian7g01774 307 MobiDBLite consensus disorder prediction 99 127 - -
Vian7g01774 307 MobiDBLite consensus disorder prediction 37 64 - -
Vian7g01774 307 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01774 Vian-Chr7 27820407 27821393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01774 28 229 AP2-EREBP Transcription Factor Family AT4G27950 42.584 7.12e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian7g01774 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01774 K13434 - gmx:100817278 362.459