Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01772 ATGAACAAAAACTTAGAAAAAATGGATATCGAAGCCAAGACAGTTTACAAACGATGGCGGTCCACCCCGGAACAAGTTAACATCTTGTTGAACATCTTCAACCATGGGATCATTAATCCTAGTCGAGATCAAATTCGCGAGATTACAGGACAACTCAAGGAGTACGGAGAAGTTGGAGAATACAGCGTCTATTGTTGGTTTCAGAACCATGGAAATCGGGTGAAGTATCGACGCTTGCCGCAAGACGTCCCTAGTACATCTGAACCTTCATATTCCCTCCTTCCGTCGTTTATGTATGATCCTTCATGGGTAATTCCACAGGCTCCAAGGCTCCTATATCTCTTTCTCATCCCCGCTATACATGAAGAAGAAGAGAAAGTTACTCAACCCATGCCGTTTCGCATCAAAGCCCCTTCCACAGAGCTTTCTTTGAGATTGTCGTTCGCCGATCAATAG 456 0.443 MNKNLEKMDIEAKTVYKRWRSTPEQVNILLNIFNHGIINPSRDQIREITGQLKEYGEVGEYSVYCWFQNHGNRVKYRRLPQDVPSTSEPSYSLLPSFMYDPSWVIPQAPRLLYLFLIPAIHEEEEKVTQPMPFRIKAPSTELSLRLSFADQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01772 151 Gene3D - 16 82 - -
Vian7g01772 151 ProSiteProfiles 'Homeobox' domain profile. 12 77 IPR001356 GO:0003677
Vian7g01772 151 PANTHER WUSCHEL-RELATED HOMEOBOX 9 17 77 IPR044557 GO:0003700|GO:0050793
Vian7g01772 151 Pfam Homeodomain 17 77 IPR001356 GO:0003677
Vian7g01772 151 SUPERFAMILY Homeodomain-like 14 79 IPR009057 -
Vian7g01772 151 CDD homeodomain 17 78 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01772 Vian-Chr7 27786512 27787062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01772 18 133 Wox Gene Family AT5G45980 35.897 2.74e-17 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian7g01772 Homeodomain 4.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01772 - - vum:124839824 215.698