Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01768 ATGAAACTCTTTGAGAAGGTTGTCTTGGCAACAGTGTCGCAACCTCTAAATATAATAAGTATTCAAGATCAGATTTCTGATCAATGGAGCGTTGAGTTAAAGGAAGCATCGGAAATAGGTAGAGCACAGAGACTATCAGAAAGATTAAGGAAAGGTAGAACTCTTGTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAACAGTAAAGCTTGTTGCATATTCCTAACAACTGGGAGTAGAGAAGTATGCACTTGTATGAAATGTCAAAATATAATTGAACTTAATCCCTTGACTAACGGGGAAGCTTGGACTTTGTTCACCTTCCATGCAAACATAAGTAATGACTCCCCAGAAGCTTTGACATATTGTGCAAGAAGAATCGTTCTTCAATGTAACGGATTGTCTACTGCAATTGTGACGTTAGGAAGCACGCTAAAAGATAAAACCATTGAAGAGTTTGAGTCAGCAGGGTTAAGACTACAAAATCCCGAACAACTTAGTTCTCTAAAAGGCTTAACAAGTCATCAAGTTTGTCTTAAAGTAAGTTATGATAATTTGACAAACCAATTAGCCAAATCCTTATTATTGTTGTGTTCAATATTTCCAAAGAATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGAATTGAGAAAGAAAGGAGGGTGATGCGTGCAGCTATTAACATCCTTAAGAATTCTTATATGTTGGCATATGTCAAAGAAAAAGAAAAGGTGAAAATGCGTGACTCGATCCGTGATGTAGCCTTATGGATTGCAGCTGAAAGTGGTCAAGCAATTTTGACATGTACTGCAGTGGATCCGAGAGTGTTGGTAGATGATGAAATCACGAAAGATAAGAATGTAATAGCCTTATGGGATATGAAAAATGGTGAACTTCTCAACTATGAATGGAATTGTCCATCACTTGAAATTCTCTTGCTTCATTCTCCACAGGTGGGAAGTTGCCTTTGGAGACAGAAACTCCATCATGGTGACATCTCAGTTTTGGAAAGTCTAGAAGCACTTGAGATTCTTGACTTGCGTGGCTCTTCTTTCAAAGAATTGCCTAATGGAGTAGTAGCATTACAGAAATTGAAACTCCTAGATTTGTACGGTTGTTTGATTGAGAAAAATAATGCTTATGAAGTTATAGGAAGATGTTTGAGGCTAGAGGAATTGTATTTGTATTTGTTTCCATCAAAAGAGGAGTTTCCACATGATGTCTCTTTCTCGAGATTGCAGAGACCATCTAGAGCTCTGTGCATAGAAGGTTTCAATGCCTCTACTCAAACTTTCATGTCATTACCAATTAAGGATCTCTTTCTGAGGGCAGTGTACCTTCATTTGAAGTACATTGAGGGAGGTTACAAAAATGTAATCCCATCCATGCGTTCACAAGGCATGAATCAGATTGTTGCCCTAATCCTTGAACACTGTCTTGATATTGAATTCCTCTTTGATGGAACTTTTACAAACAACAATGTTGATATGCTTCATACCAAAACTGTATTTTCCAACCTATGTACCGTAAGGTTGCATCAGATGCATGGCCTTCGAGAAGTGTTTCATGACCCTTCTTCACAATGCTCTTTAGAAAAATTAGAAGAGTTGAGCATTGATAGTTGTAACCAATTATACAACATATCCTTCCCAAGGAACTCAAATCTATGCAGTCTAAAGGTCTTGAAAATTCAAAGTTGCCCAATGCTAACTTCTCTCTTCATTCCATCCTTTGCCCAAACTCAAGTGTTTGGTGATAGCTCTTCGCAATGCTCTCTAGAAAATTTACAAGAGCTACTCATATATCATTGTGAGAAATTATACAACATATCCTTCACTAGGAACTCAAAGCTATGCAGTCTTAAGGAGTTAAGAATAACAAGTCTCTTCATGCCATTCATTGTCCAAACTCTGAAGCTGCTGGAGGTTCTGCAAATATATGAATGCAGTGAATTGATGCACATAATTCCAGCAGAAGGGAATGATTATGTTGGTACTCAAGATCATACATCTTTGATGCTCCCAAAATTAAGGATTATTGAGATTGCAGGATGTGACAAGTTGAAATATATATTCCATGTGTGTTTTGGAAGGCTACCAAGTTTGGAAAGGCTGATCACTAAAAATTGTGACAAGTTGAAGTATGTATTTGGCACTGAAAAGGAACATCATCTTTCAATGTACCATGAGTATCCAGATTTGCTTAATTTGGAAGTTCTCTTGTTAGTTTCCTTACCTAACCTGGTTGACGTTTGGCCTTCTTATTGTCATCCACGTTTACCAAATTTGAAAGAGTTACAATGCACTGAATGTTCAACATTGTCTAACTCTTCTTTGAGGAAGATGGCGATTGCTTCAGGTCTATACCACCAAGGCACAACTGAAATGGTTATCTACTCTGGAATTGCTGGATCTACCACAACTCAAATTCATATGGAAAAGCCCCACAAATTTTCTAAGCCTCCAACTGCTTCAATTTTTACATGTGGATAG 2529 0.3725 MKLFEKVVLATVSQPLNIISIQDQISDQWSVELKEASEIGRAQRLSERLRKGRTLVILDDVWEKLNFEALGIPFDENSKACCIFLTTGSREVCTCMKCQNIIELNPLTNGEAWTLFTFHANISNDSPEALTYCARRIVLQCNGLSTAIVTLGSTLKDKTIEEFESAGLRLQNPEQLSSLKGLTSHQVCLKVSYDNLTNQLAKSLLLLCSIFPKNHEIDLEDLFRFGRIEKERRVMRAAINILKNSYMLAYVKEKEKVKMRDSIRDVALWIAAESGQAILTCTAVDPRVLVDDEITKDKNVIALWDMKNGELLNYEWNCPSLEILLLHSPQVGSCLWRQKLHHGDISVLESLEALEILDLRGSSFKELPNGVVALQKLKLLDLYGCLIEKNNAYEVIGRCLRLEELYLYLFPSKEEFPHDVSFSRLQRPSRALCIEGFNASTQTFMSLPIKDLFLRAVYLHLKYIEGGYKNVIPSMRSQGMNQIVALILEHCLDIEFLFDGTFTNNNVDMLHTKTVFSNLCTVRLHQMHGLREVFHDPSSQCSLEKLEELSIDSCNQLYNISFPRNSNLCSLKVLKIQSCPMLTSLFIPSFAQTQVFGDSSSQCSLENLQELLIYHCEKLYNISFTRNSKLCSLKELRITSLFMPFIVQTLKLLEVLQIYECSELMHIIPAEGNDYVGTQDHTSLMLPKLRIIEIAGCDKLKYIFHVCFGRLPSLERLITKNCDKLKYVFGTEKEHHLSMYHEYPDLLNLEVLLLVSLPNLVDVWPSYCHPRLPNLKELQCTECSTLSNSSLRKMAIASGLYHQGTTEMVIYSGIAGSTTTQIHMEKPHKFSKPPTASIFTCG 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01768 842 Gene3D Ribonuclease Inhibitor 302 452 IPR032675 -
Vian7g01768 842 Gene3D - 107 197 IPR042197 -
Vian7g01768 842 PRINTS Disease resistance protein signature 141 155 - -
Vian7g01768 842 PRINTS Disease resistance protein signature 566 582 - -
Vian7g01768 842 PRINTS Disease resistance protein signature 48 62 - -
Vian7g01768 842 Pfam NB-ARC domain 4 195 IPR002182 GO:0043531
Vian7g01768 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 207 IPR027417 -
Vian7g01768 842 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 712 789 - -
Vian7g01768 842 Gene3D Ribonuclease Inhibitor 454 809 IPR032675 -
Vian7g01768 842 Gene3D - 1 104 IPR027417 -
Vian7g01768 842 SUPERFAMILY L domain-like 258 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01768 Vian-Chr7 27701083 27704555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01768 33 270 WRKY Transcription Factor Family AT5G45050 26.908 4.91e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01768 - - gmx:102669181 785.793