Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01767 ATGGCAAGGCGTGGCACGAGCAACACTTACGAAGAGGCTAGAAAACAGAGACTTGAAGAAAATAAAAAGAGGTTTGAGGATTTGGGAATTTTAAGGATTTCAAAAAATTTGACCGAGATCACAAGTTCTGGAAAGAAGACACGGGATCATGTTCCTAAACTGAAATCAAAGAAATCAAATGCTGAAGTGGAACCTAGGCGATCTTCTCGTGTGCGGAACCCAGTTCCTTCATACAGGGAAGATGTGAGCGTACACCTTCCAGCTTTGAGGAAGAGGTCAAGATCAAATTCTTCAACATGGGGAAGTTACATTGCGAGGCCTTTAGATGAAATCAAAGAAGCCTCAAAAGAGGAAAGACTTTGTGCTCTGGAGGCTGCAGAAGAACTCCAAATCAATCTGAACTCTTCAAATCCCTCCTTTATCAAGTCAATGGTTCGGTCTCACGTTTATAGCTGCTTTTGGTTGGGTCTTCCTTCTAAGTTTTGTGAGGAACATCTTCCAAAAACTGTACATGACATGGTTTTAGAAGATGAAAATGGTTCAGAATACCAGGCTGTTTACATAGGCAACAGAGCTGGATTAAGCGGAGGCTGGAGAGCATTTGCATTGGATCATAAACTGGATGATGGAGATGCCCTTGTTTTTGAATTGATTGAAGCATCGAGATTTAAGGTAATTAGTTTTAGCACTCTTGTAACACTACTTGAAAGCCCTAAAAGTGTTATGCCTGTATCACTACTATTTTCTACATCTCAGGATAAAGTGATTTCATCTGTTCCATTCTCCATGACTATCTTTGAGTGTATATCTTTTATCACTATAGCTGCATGA 831 0.4019 MARRGTSNTYEEARKQRLEENKKRFEDLGILRISKNLTEITSSGKKTRDHVPKLKSKKSNAEVEPRRSSRVRNPVPSYREDVSVHLPALRKRSRSNSSTWGSYIARPLDEIKEASKEERLCALEAAEELQINLNSSNPSFIKSMVRSHVYSCFWLGLPSKFCEEHLPKTVHDMVLEDENGSEYQAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKVISFSTLVTLLESPKSVMPVSLLFSTSQDKVISSVPFSMTIFECISFITIAA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01767 276 MobiDBLite consensus disorder prediction 1 21 - -
Vian7g01767 276 Pfam B3 DNA binding domain 140 224 IPR003340 GO:0003677
Vian7g01767 276 MobiDBLite consensus disorder prediction 42 69 - -
Vian7g01767 276 Gene3D - 115 231 IPR015300 -
Vian7g01767 276 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 53 228 IPR044837 -
Vian7g01767 276 SUPERFAMILY DNA-binding pseudobarrel domain 135 228 IPR015300 -
Vian7g01767 276 SMART B3_2 140 231 IPR003340 GO:0003677
Vian7g01767 276 Coils Coil 8 28 - -
Vian7g01767 276 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Vian7g01767 276 CDD B3_DNA 138 229 IPR003340 GO:0003677
Vian7g01767 276 MobiDBLite consensus disorder prediction 38 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01767 Vian-Chr7 27656455 27659770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01767 10 228 B3 DNA Binding Superfamily AT5G58280 53.629 6.47e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vian7g01767 B3 1.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01767 - - vra:106764146 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01767 7 27656455 27659770 Vian7g01767 7 27656455 27659770 ECH