Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01765 ATGGGGAAACAGATTGTGCCGGTGAAATCGGTGATATACGCTCTCTCCCCTTTCCAGCAGAAGGTAATGACGGGTCTCTGGAAGGACTTGCCCACCAAGATTCATCACAAGGTCTCCGAGAATTGGATCAGCGCCACTCTCTTGCTCGGTCCCCTCGTTGGAACCTACGCGTATGTTCAGAACTACCTGGAAAAGGAGAAGCTTCATCACAGTTCAAGGCCACTACTGGGGAACCAGAACCATGGTGGAAACTCTTTTAATTCCCTTAGAACAACTTTCTTGTCCAAGCTTCCTGATAAGGTCCGTTGTGGCCTAGACTTTGAGTCTCCCTTTGAGTTTGATCATAATTTCTCCAATACCACCCAGTTAACCCAAGGAGAGAAAGAATATTATGAAAGGCAATTTGCTACTCTGAAGTCATTTGAAGAAGTTGACTCCATAGTAACATTGGACTGCACTGATGCAGAAGACATTGAAAAGCAAGCCCAACATGAACGAGCAATGAAGATTTCTAATTATGCAAATGCAGCTTTATTGGCATTGAAGATTTATGTGACTATAAGGAGTGGATCAATAGCTGTTGCAGCATCAACGTTGGATTCTCTGCTTGATTTCATGGCTGGTGGCATACTTTGGTTCACCCACCTTGCAATGAAGGATATAAACATGTATAAATACCCAATTGGGAAGTTGAGGGTGCAGCCAGTGGGAATTATTATCTTTGCTGCAGTCATGGCGACACTTGGCTTTCAGGTACTAATCACATCTACACAACAACTGATAGAAAACAGTCCTCCTGAGAAGATGTCTTATGATAAACTGGTATGGTTGTACTTAGTTATGATATTTGCAACATTGGTGAAGCTTGCACTCTGGCTTTATTGTAGAAGCTCAGGAAGCAAAATTGTCCGTGCCTATGCAGATGATCACCACTTTGATGTTGTAACAAATGTGATTGGATTAGTTGCAGCTGTTCTTGGTGATAAATTTTACTGGTGGATTGACCCGGTTGGAGCTATTCTACTTTCAATTTACACTATCACAAATTGGTCTGGCACTGTGATAGAAAATGCAGTTTCACTAGTGGGACAATCTGCATCTCCTGAAGTTCTGCAGAAGCTGACATATCTTGCCGTAATGCACTCTCATCAAATTAAGCGCATTGACACTGTCCGCGCCTACACATTTGGTGTTCTATATTTTGCGGAGGTTGACATTGAACTGCCGGAGGATTTACCCTTAAAAGAAGCACATGCCATTGGAGAGAGCCTTCAGATAAAGCTAGAGAAACTTCCAGAAGTTGAGAGAGCATTTGTTCATCTAGACTTCGAATGTGATCACAAACCAGAACACTCAGTTCTTAGCAAACTTCCAGATACTCGGCCTTAA 1389 0.4269 MGKQIVPVKSVIYALSPFQQKVMTGLWKDLPTKIHHKVSENWISATLLLGPLVGTYAYVQNYLEKEKLHHSSRPLLGNQNHGGNSFNSLRTTFLSKLPDKVRCGLDFESPFEFDHNFSNTTQLTQGEKEYYERQFATLKSFEEVDSIVTLDCTDAEDIEKQAQHERAMKISNYANAALLALKIYVTIRSGSIAVAASTLDSLLDFMAGGILWFTHLAMKDINMYKYPIGKLRVQPVGIIIFAAVMATLGFQVLITSTQQLIENSPPEKMSYDKLVWLYLVMIFATLVKLALWLYCRSSGSKIVRAYADDHHFDVVTNVIGLVAAVLGDKFYWWIDPVGAILLSIYTITNWSGTVIENAVSLVGQSASPEVLQKLTYLAVMHSHQIKRIDTVRAYTFGVLYFAEVDIELPEDLPLKEAHAIGESLQIKLEKLPEVERAFVHLDFECDHKPEHSVLSKLPDTRP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01765 462 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 365 442 IPR036837 -
Vian7g01765 462 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 94 452 - -
Vian7g01765 462 Gene3D Cation efflux protein, cytoplasmic domain 369 459 IPR036837 -
Vian7g01765 462 SUPERFAMILY Cation efflux protein transmembrane domain-like 163 363 IPR027469 -
Vian7g01765 462 Pfam Dimerisation domain of Zinc Transporter 369 442 IPR027470 -
Vian7g01765 462 Pfam Cytochrome b-c1 complex subunit 8 1 70 IPR020101 GO:0005750|GO:0070469
Vian7g01765 462 Gene3D - 4 72 IPR036642 GO:0005750|GO:0006122
Vian7g01765 462 Gene3D Cation efflux protein transmembrane domain 164 361 IPR027469 -
Vian7g01765 462 Pfam Cation efflux family 170 362 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vian7g01765 462 FunFam Metal tolerance protein 4 369 459 - -
Vian7g01765 462 FunFam Metal tolerance protein 4 167 361 - -
Vian7g01765 462 NCBIfam cation diffusion facilitator family transporter 165 442 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01765 Vian-Chr7 27638722 27646532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01765 1 70 Chloroplast and Mitochondria Gene Families AT3G10860 75.714 7.97e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01765 - - gmx:100802103 638.647