Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01747 ATGCCATCCTCAGTTCTATCCAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCTGCTCATGCTGCAGCAACTAATAGCTGCTTTACAGTGTTCTATAATCCAAGGGCAAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATATTAAAGCTGTGTACCACACACGAGTGTCTGTTGGTATGCGTTTTAGGATGCTTTTCGAGACTGAAGAATCAAGTGTACGCAGGTATATGGGTACTATAACTGGCATAAGTGACCTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGGTCTGTTAAGGTTGGCTGGGATGAATCAACAGCAGGAGAGAGACAGCCACGAGTATCATTGTGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCACTGTTTCCTCTTAGATTGAAACGGCCATGGCATCCTGGCACCTCTTCTTTTCATGATGGCAGTTATGAAGCGACGAATGGGCTAATGTGGCTGAGGGGTGGACCTGGAGACCAAGGTCTCAATTCCCCGAGTTTTCAAGGGTCTGGTTTGTTGCCATGGATGCAGCAGAGAATGGATCCAACTTTGCTTGGAATTGATCATAATCAGCAGTACCAAGCCATGTTTACATCTGGTTTGCAGAACTTAGGGAGTGGAGATCTGATGAGACAACAAATGATGAATTTTCAACAGCCTTTCAATTATCTTCAACAATCAGGAAACCCCAATCCTTCTTTGCAGCTTCAGCAACCACAAGCAATTCAGCAATCCGTAACTTCTAATAATATCCTACAGCCACAAGCCCAAGTATTGGCAGAGAACCTGTCACAGCATCTCCTTCAGAAATCACACAATCGTGAAGACCAAACACAACAGCAGCAGCAGCAGCACGCTTATCAAGATACTGTTTTACTTCAAAGTGATCAGCTGCATCAAAGGCAACACTCTGGTTTACCTTCACCATCATATTCAAAACCAGATTTCTTAGATTCAAGCATGAAGTTCCCTGCTACCGTTTCTCCAGGACAAAATATGCTGAGTTCACTTTGTCCTGAAGGGAGTGGCAGTCTCTTGAATTTATCCAGAAGTGGTCAGTCAATGCTGACTGAACAACAGTTACCCCAACAACCATGGGCCCCAAAGTTTACACCTTTGCAGGTCAATACTTTTGGCAACTCAATGCCCCACGTGCAATATTCTGGAAAAGATACCGCAATGGTGTCACCACACTGTAACTCAGACACCCAAAATCCTATTCTATTTGGTGTCAACATCGATTCATCTGGCCTTCTGCTCCCTACCACTGTCCCTCGTTATACCACCGCATCGGCTGACACTGATGCATCAGCAATGCCATTAGTGGAGTCTGGATTCCAAACTCCTCTATACCCTTGCGTCCAAGATTCATCAGAGTTGTTGCGAAGTGCAGGGCAAGTTGACCCTCAGAACCAGACACGAACATTTGTCAAGGTTTACAAATCAGGGTCGGTAGGGCGGTCACTTGACATCTCCCGGTTCAGCAGTTATCATGAGCTGAGGGAGGAGTTGGCACAGATGTTTGGTATTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTGAATAATGTTTGGTACATCAAAATACTTTCACCTGAAGATATCCAGAAAATGGGAGAACAAGCCGTAGAATCCCTTGGTCCAAGTTCAGGACAGAGGCTGAATAGCACTGGTGCAGATTCCCATGAAATTGTTTCTGGACTTCCATCAATAGGCTCCCTTGAATACTGA 1836 0.4515 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFHDGSYEATNGLMWLRGGPGDQGLNSPSFQGSGLLPWMQQRMDPTLLGIDHNQQYQAMFTSGLQNLGSGDLMRQQMMNFQQPFNYLQQSGNPNPSLQLQQPQAIQQSVTSNNILQPQAQVLAENLSQHLLQKSHNREDQTQQQQQQHAYQDTVLLQSDQLHQRQHSGLPSPSYSKPDFLDSSMKFPATVSPGQNMLSSLCPEGSGSLLNLSRSGQSMLTEQQLPQQPWAPKFTPLQVNTFGNSMPHVQYSGKDTAMVSPHCNSDTQNPILFGVNIDSSGLLLPTTVPRYTTASADTDASAMPLVESGFQTPLYPCVQDSSELLRSAGQVDPQNQTRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLGPSSGQRLNSTGADSHEIVSGLPSIGSLEY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01747 611 SUPERFAMILY CAD & PB1 domains 483 559 - -
Vian7g01747 611 MobiDBLite consensus disorder prediction 578 597 - -
Vian7g01747 611 FunFam Auxin response factor 480 574 - -
Vian7g01747 611 Gene3D - 481 574 - -
Vian7g01747 611 Gene3D - 57 129 - -
Vian7g01747 611 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Vian7g01747 611 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 574 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vian7g01747 611 FunFam Auxin response factor 57 129 - -
Vian7g01747 611 Pfam AUX/IAA family 482 569 IPR033389 -
Vian7g01747 611 ProSiteProfiles PB1 domain profile. 485 569 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01747 Vian-Chr7 27372221 27375723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01747 1 582 B3 DNA Binding Superfamily AT5G37020 63.176 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01747 - - vun:114193813 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01747 7 27372221 27375723 Vian7g01747 7 27372221 27375723 ECH
Vian6g00784 6 24835798 24841853 Vian7g01747 7 27372221 27375723 PCT