Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01735 ATGCTTGTGTTAACATGTTGCTTTTCGGTTAATTTTGTGCATGGCAGGGAATTCAAGCTTCTCTATAATCTCTGTTCCAAGTTCCACCCTACTGACGAAGAACTCGTTGCTTATTACCTTAAAAGGAAAATCAATGGCCGAAAGATTGAGCTGGAAATCATTCCAGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCAGGGAAATCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGCCCTCGTGACAGAAAATACCCAAATGGATCAAGAACAAACCGAGCAACAAAATCTGGGTATTGGAAAGCAACAGGGAAGGATAGAAAGGTAAATTCGAAGGCTCGTTCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGCACAAATTGGGTTATGCATGAATATCGTCTTGATGAGACAGAATGCGAAACTGCTTCAGGCTTGCAGAAGACTGCAGTGATTCCTCAAAAAGTTGAGGGGCAGTATGTTAATGTTCCCAATGTCAATCAGATTACAAGCGATCAATCATCGAGCATTGAACTATACTCTGAAGGAAGGGGCGAAGATTTAGTAGATAGCTCAAATTATTTTATGTCTGTGGATACTTGTTCACCACACAATGTTGGAACTGAGACTCCTCTCACCATAAGTGGTGGAACGACAATGGATCATGTAAAATGGTCACACTTCTCATCACAAGATTCAATATTTAGTCTTCCAACTTCTTCATATCCTAATTTTGGAGCCATAGCATACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTGTTATGCCCCCTTTGGAGGTGGATGACTTCCCTCAAGTTGGAATCTCTGAGCTGAAAATGACACAAGCTTCTAGTTCCATGCAAGGAAGCAGAACTGAAACAGATATCTTACAGGAAATTCTTTCAGTGGCTCAGGCCTCTCAGGAATTAATAAATCAATCCAACAACTCACAGGATTGGTGTGGCAATGATTATTATGCTCCTCGTGATGACGATTTTGCCTTCATGGTTGGCACTAACTACAATCATTCAAATGAAATAATGAGCTCAGTGAGGTATGTTGACAAAGCATGGGAAGATGCAAATACAAGGACAATAGAGATCGGAGATATGGATGAAGAATTTAAGTTGGAGAGGAATGTAGAGAATTTAAGATGGGTCGGAATGTCAAAAGAAGATTTAGAAAAGATGGAAGAACAAAATATTGTCCCAATAGAGGATATTTCAAGCTTCCAAACTAAGATGAAAGAAAATGAGGTGCAAGAATCTGAGCAACACAGTAACATGGAACATAATGGTACTGAAATAAATGATTTCTCATTGGGTTTCATCAATGATGACGATCCTACAGAGAACTTGACAGAAGATGGTAACAAGGATGATTATTCAAGTTCTCCTAGTTTTGAGGTTGTTGAGGAAATAAAGGTTAATCGTGGAATGTTTGTTTCGACTCGTCAAGTGGCGGAGACATTCTTTCAGCAAATGGTTCCTTCACAAACAGTCCAAGTTCAGCTTAATACAGTGATGGCACACAATCATTACGTAGAGAATGCAGAGGCAATGGTGTTGATAATGGAGGACCAAGGGTCTTTAAGGAAGGTTAAGGCCTATGTGATGGGGAAGCTAATAAAGCCATCAATGACAATAGCAAGTGCGATTGTATTCGTCTTTGCACTTGTGCTGATGCACTATGCTTTTATAAAGGGAGAAGTGAAATTTTGGAATGAGACATGTTGCAGTAATAGTGATAACATCATGAAGAAAACGAATCTATCATGTCAGATAATGAATGAGTCAAATGATGTTTGGTTTATTGGTATCAAAAGTGGAAAAGGTTTAAGTGCAGTCTTGAAGAAAATAGGCATTTTTCTGACTATATTCTTTGCTCTTTGTGCCATGTGGGCTAACCATAGTTGA 1983 0.3969 MLVLTCCFSVNFVHGREFKLLYNLCSKFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKARSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDETECETASGLQKTAVIPQKVEGQYVNVPNVNQITSDQSSSIELYSEGRGEDLVDSSNYFMSVDTCSPHNVGTETPLTISGGTTMDHVKWSHFSSQDSIFSLPTSSYPNFGAIAYPPSKVDIALECARMQHRFVMPPLEVDDFPQVGISELKMTQASSSMQGSRTETDILQEILSVAQASQELINQSNNSQDWCGNDYYAPRDDDFAFMVGTNYNHSNEIMSSVRYVDKAWEDANTRTIEIGDMDEEFKLERNVENLRWVGMSKEDLEKMEEQNIVPIEDISSFQTKMKENEVQESEQHSNMEHNGTEINDFSLGFINDDDPTENLTEDGNKDDYSSSPSFEVVEEIKVNRGMFVSTRQVAETFFQQMVPSQTVQVQLNTVMAHNHYVENAEAMVLIMEDQGSLRKVKAYVMGKLIKPSMTIASAIVFVFALVLMHYAFIKGEVKFWNETCCSNSDNIMKKTNLSCQIMNESNDVWFIGIKSGKGLSAVLKKIGIFLTIFFALCAMWANHS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01735 660 FunFam Nac domain-containing protein 86 31 173 - -
Vian7g01735 660 ProSiteProfiles NAC domain profile. 22 173 IPR003441 GO:0003677|GO:0006355
Vian7g01735 660 Gene3D NAC domain 31 175 IPR036093 GO:0003677|GO:0006355
Vian7g01735 660 SUPERFAMILY NAC domain 25 158 IPR036093 GO:0003677|GO:0006355
Vian7g01735 660 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 27 302 - -
Vian7g01735 660 Pfam No apical meristem (NAM) protein 27 149 IPR003441 GO:0003677|GO:0006355
Vian7g01735 660 MobiDBLite consensus disorder prediction 443 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01735 Vian-Chr7 27157863 27161586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01735 27 584 NAC Transcription Factor Family AT1G65910 45.660 1.04e-144 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian7g01735 NAM 8.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01735 - - vum:124843561 1066.6