Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01725 ATGATAGCTCACCTTTTCAATGCACCACTCGAGGAGTCAGAACCTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAAAGGAGATGGCAGAATAGAAGGAAACAAGAAGGGAAGCCTTGTGATAGTCCCAATATTGTTACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCGAGGTACTTTGAAGTGGAGTTGAAAGAGGTGAAGCTGAGTGATGGATACTTTGTAATGGACCCTGACAAAGCAGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTTTGAACGGAGAGTTTGAAGATGTCAAGCGCTTAAATGATCTCCTACTAGAAAAGAATCAGACAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCGTTTCTTTATCCAGAGCTTGAGTGGGACTTTCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAACCAAGGAAGACCTTCCCGAGGAACTCATTTTCCACATTAATTATCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCCCAGTACTACCAACTAATTCGATTGGGTTTTGAGGGATACAAAATGGTGATGGAAAACTGCAGAGACAACATGGCAGTGCTTAAGGAAGGTCTAGAGAAAACTGAAAAGTTCGACATTGTGTCTAAAGACATCGGTGTCCCATTGGTGGCCTTCACTTTGAAGGATCACAGCCACTTCAATGAGTTCCAAATCTCTGACCTGCTGAGGCGCTATGGATGGATAGTGCCAGCATACACTATGCCTCCAGATGCAGAAAATGTCACAGTACTTCGTGTTGTGGTTAGGGAGGACTTCTCTCGCACCCTTGCGGAGCGTCTTGTCACTGATCTCACCAAAGTGGTGCACGAGCTGGAGCTGCTTCCTGCTAGGGTAATCAGCAGCACCGTAACGACTGGAGAAGATGGTGAAGTCACCGAGGGAAAAGTATTGGTTGCCAAGAAGAGTGAATTAGAGACACAGAGGGCAATCACTTCAGCTTGGAAGAAGTTTGTGATGGAGAAGAAGAAGATGAATGGTGTTTGTTAG 1200 0.4592 MIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRRWQNRRKQEGKPCDSPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYFVMDPDKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLLEKNQTTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKMVMENCRDNMAVLKEGLEKTEKFDIVSKDIGVPLVAFTLKDHSHFNEFQISDLLRRYGWIVPAYTMPPDAENVTVLRVVVREDFSRTLAERLVTDLTKVVHELELLPARVISSTVTTGEDGEVTEGKVLVAKKSELETQRAITSAWKKFVMEKKKMNGVC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01725 399 NCBIfam glutamate decarboxylase 1 343 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian7g01725 399 Gene3D - 259 346 - -
Vian7g01725 399 Gene3D - 1 258 IPR015421 GO:0003824
Vian7g01725 399 SUPERFAMILY PLP-dependent transferases 1 342 IPR015424 -
Vian7g01725 399 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 279 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vian7g01725 399 FunFam Glutamate decarboxylase 1 258 - -
Vian7g01725 399 PANTHER GLUTAMATE DECARBOXYLASE 1 399 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian7g01725 399 FunFam Glutamate decarboxylase 259 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01725 Vian-Chr7 27035762 27037457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01725 1 399 Calmodulin-binding Proteins AT5G17330 80.500 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01725 K01580 - gmx:100791696 731.48