Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01717 ATGACCTTGGAGGGGATTTTCATTGAGCCTACTTCAACCACTGCTCCTGATCTTTCTCTTCACATAAGCCCCCCAAGCATCTCCTCTTCCTTAATTTCCAATACCAACAACATCATCAATTATGAACCCCAACCTAGTTTCCTTTCAAGGACTGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGAAATTTCACTTCGGCAAGGGAAACACCACCACCACCACCAACTCCAACACCACACAACCCTTATTATCCAACCCAAACCCAAACCCATTTCCATCATCTTCTCCACAGCAGCAGCAGCAGCAGCACTACTACTACTAGTAATATTCCAACAAGTGTTCCTACAAGTGCCAACACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTATCATCATCAGACGGTTTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCGTTCCCTTTTGTGGCCATGGACCATGCTAGAGACAACAAGGATCCTCATACCAAGATGTGCTTATATCATCACATGCCTTCTTACCCATCTCTCTCTTCCTCGTGTTCCTCTCTGTGCTCCACAACCGCTCCTTCTTCTTCGCCTTCGCCTTACTTCGTGGATCCCATGTCCTTCTTGAACAACGCTTCCACCGTGGGGTGTAGGACAGCCACTGCCACAAGGTTTAATGGATTTTCCGGCGATGCTTTCAAATCTCATCCATTGCACCAATATGGGGTAGGCTCTTCAGAAGCCTCTTCGGGGTTCATGAGATCAAGGTTTTTGTCTAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCTCGATTTGTCCATGCGGTAGAGCTTCTCGGAGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACATTAGCTCATGTGAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCATCTTCAGGCCATTCAGATGGGTCTGGAGAGGATGACTTATCTCCTATTGGCAGCACCGCCGATCGGGGCAGTCTCCGGCAATTTCCCAGCCACAGAGGGCGGCCGGATTGGGTGGCGCAACAAGACATGGACTACTCTTCCACCACCACTCTTTGGAGTAATTCTTCAAGTTGTGGAGAATCGCGACAAAGAACAACTTCTAACGACATAGATGGTCTGAGATCACCTATTATCCAGTCACAAACAATATCAGGAGCTCATCAAATTCAGGAGTGTGATTCAACACAACAGAAGAACAACATGGGAGGTTCTAATTTGGAGTGCAAGAATCCAAGCTTGGAATTCACATTAGGAAGACCACATTGGGATGGCAAAGAGCAAGCGTAA 1395 0.471 MTLEGIFIEPTSTTAPDLSLHISPPSISSSLISNTNNIINYEPQPSFLSRTVSQAHTELSLGRNFTSARETPPPPPTPTPHNPYYPTQTQTHFHHLLHSSSSSSTTTTSNIPTSVPTSANTPLNHINYGVSLLDVSSSDGLRPIKGIPVYHNRSFPFVAMDHARDNKDPHTKMCLYHHMPSYPSLSSSCSSLCSTTAPSSSPSPYFVDPMSFLNNASTVGCRTATATRFNGFSGDAFKSHPLHQYGVGSSEASSGFMRSRFLSKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPIGSTADRGSLRQFPSHRGRPDWVAQQDMDYSSTTTLWSNSSSCGESRQRTTSNDIDGLRSPIIQSQTISGAHQIQECDSTQQKNNMGGSNLECKNPSLEFTLGRPHWDGKEQA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01717 464 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 462 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vian7g01717 464 SUPERFAMILY Homeodomain-like 271 327 IPR009057 -
Vian7g01717 464 MobiDBLite consensus disorder prediction 84 118 - -
Vian7g01717 464 MobiDBLite consensus disorder prediction 377 408 - -
Vian7g01717 464 MobiDBLite consensus disorder prediction 69 83 - -
Vian7g01717 464 Gene3D - 273 330 - -
Vian7g01717 464 MobiDBLite consensus disorder prediction 63 118 - -
Vian7g01717 464 MobiDBLite consensus disorder prediction 432 447 - -
Vian7g01717 464 NCBIfam myb-like DNA-binding domain, SHAQKYF class 274 327 IPR006447 GO:0003677
Vian7g01717 464 MobiDBLite consensus disorder prediction 432 464 - -
Vian7g01717 464 FunFam Myb family transcription factor 272 330 - -
Vian7g01717 464 MobiDBLite consensus disorder prediction 331 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01717 Vian-Chr7 26928704 26933463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01717 1 461 G2-like Transcription Factor Family AT5G16560 39.759 1.63e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian7g01717 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01717 - - gmx:100796325 615.92