Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01714 ATGGTGAGCAGTACCACCACCACCACCACCACCTACTTTCCAAATCCTCTACCCTTCTTCATTTTCTTAACCATGATGACCTTCTTCGCCAACTCCCAGGACGATGTTTCAGTAATGCTGGCTCTCAAGAACAGCCTCAACCCGCCGGGATGGACCGGCCCGGACCCATGCAAGTGGGACCAGGTCAGGTGCTCCGAAGATAAACGGGTCACACGGATCCAAATTGGCCGCCTCAATCTCCAGGGCACTCTCCCTGCAACTATTCAGAACTTGACCCAGTTGGAACAGTTGGAGCTCCAATACAACAACATCTCGGGTCCCATTCCCTCGCTTAACGGCTTGACCAACCTCCGTGTCTTCATTGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCGCCGGCATGTCGCAGCTCCAGGCGGTGGAGATCGACAACAACCCCTTTGAGCCCTGGGAGATCCCTCAGACTCTCCGAAACGCTTCTGTGCTTCAGAACTTCTCCGCCAACTCTGCCAATGTCAGAGGCACTTTGCCGGATTTCTTCAGCTCCGACGTGTTTCCTGGTTTGACGGTTTTGCACTTGGCCATCAATAACCTCGAGGGGGCGTTGCCTTTGAGCTTTTCTGGCTCTCAGATTCAGTCTTTGTGGTTGAATGGGCAGAAGAGCGTTAACAGGCTCGGTGGCAGTGTTGCTGTTTTGCAGAACATGACTTTCTTGACGGAGGTTTGGTTGCACTCCAATGCTTTTACGGGTCCGTTGCCTGATTTGTCCGGGTTGAAGAGTTTGAAGGTTTTGAGTTTGAGGGATAACAGGTTTACAGGTCCTGTTCCGCCTTCGTTGGTGGGTCTCAAGACACTTGAAGTTGTGAACTTGACTAATAACTTGTTTCAGGGTCCTATGCCGGTGTTTGGCAATGGAGTTGAGGTAGATAACGATAAGGATTCCAACAGTTTTTGTTTGTCAGGACCTGGTGATTGTGATTCCAGGGTGCAGGTTCTTCTTTCTGTTGTTGGGCTTATGGGGTATCCTCAAAGGTTTGCCGAGGGTTGGAAGGGGAATGATCCTTGTGCTGATTGGATTGGAATTGCTTGTGGAGATGGGAATATAACTGTTGTTAATTTTCAGAAGATGCAACTTAGTGGTGAGATATCCCCGGATTTTTCAAAGATTAAATCTTTGCAAAGAATAGTACTTGCGGATAACAATCTCACTGGTTCAATTCCAGTAGAGCTTACTACTTTGCCTCGGCTTAGTCTATTGAATGTTGCGAACAATCAGCTTTATGGGAAGGTGCCGAGTTTTAGGAGTAATGTAGTTGTGAGTACTAATGGTAATGTTGATATAGGGAAGGATAAGAGTAGCCAGTCCCCTCAGGGTTCAGTGTCTCCAACGGCTCCCAATTCAAAGGGAGAAAATGGTGGGGGTTCTGGAAATGGTGGCAAAAAGTCTTCCCATGTGGGAGTGATCGTGTTTTCAGTGATTGGGGCGGTTTTTGTGGTTTCTATGATTGGTTTCCTGATTTTCTGCCTGTTTAGGATGAAGCAAAAGAAGTTGAGCAGGGTCCAGAGCCCAAATGCTCTAGTTATTCATCCTAGGCATTCTGGGTCGGATAATGAGAGTGTGAAGATAACCGTTGCAGGTTCAAATGTCAGTGTTGGTGGTGTCAGTGAAACGCGAACCATACCTGGCAGTGAGGCAGGAGATATCCAAATGGTTGAAGCCGGAAACATGGTCATTTCCATACAAGTTCTGAGAAATGTCACAGGCAACTTCAGTGAGAAGAACATATTGGGACAAGGAGGTTTCGGAACGGTTTATAGAGGTGAACTCCATGATGGTACAAGAATAGCAGTGAAAAGAATGGAGTGTGGAGCAATAACAGGGAAGGGTGCAGCAGAATTCAAGTCGGAAATTGCTGTTTTGACAAAAGTTCGCCACCGGCATCTTGTGGCTCTTCTAGGTTACTGCTTGGACGGGAATGAGAAGCTGCTTGTGTACGAGTACATGCATCAAGGAACATTGAGCAGGCATCTTTTCAACTGGCCAGAGGAAGGACTGGAACCACTGGAGTGGAACAGAAGATTGACGATTGCCTTAGATGTGGCAAGGGGTGTCGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGGGACTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCTGATTTTGGTCTTGTGCGTCTTGCTCCGGAAGGAAAAGCCTCTATAGAGACAAGAATTGCAGGCACTTTTGGATACTTGGCACCTGAGTATGCAGTGACTGGCCGTGTGACAACTAAAGTTGACGTGTTCAGCTTTGGGGTAATATTGATGGAGCTGATAACAGGAAGAAAAGCACTTGATGAGACTCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGCAGAATGTCCATAAATAAGGACTCATTCCGCAAGGCCATTGACTCCGCAATTGATCTCAACGAGGAAACTCTTGCCAGTATTCACACTGTTGCAGAGTTAGCTGGCCACTGCTGTGCCAGGGAGCCATATCAAAGGCCTGACATGGGTCATACTGTTAACGTGCTTTCTTCTCTCGTTGAACTCTGGAAACCATCTGATCAGAATTCTGAAGATATATATGGCATTGACCTTGACATGTCCTTGCCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTAAAAGTCAAATGGAGTCCTCTTCTTCATCTTCGCTTCTACCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCATATGGATTTGCTGATTCTTTCACATCAGCAGATGGTAGGTGA 2847 0.4745 MVSSTTTTTTTYFPNPLPFFIFLTMMTFFANSQDDVSVMLALKNSLNPPGWTGPDPCKWDQVRCSEDKRVTRIQIGRLNLQGTLPATIQNLTQLEQLELQYNNISGPIPSLNGLTNLRVFIASNNRFSAVPADFFAGMSQLQAVEIDNNPFEPWEIPQTLRNASVLQNFSANSANVRGTLPDFFSSDVFPGLTVLHLAINNLEGALPLSFSGSQIQSLWLNGQKSVNRLGGSVAVLQNMTFLTEVWLHSNAFTGPLPDLSGLKSLKVLSLRDNRFTGPVPPSLVGLKTLEVVNLTNNLFQGPMPVFGNGVEVDNDKDSNSFCLSGPGDCDSRVQVLLSVVGLMGYPQRFAEGWKGNDPCADWIGIACGDGNITVVNFQKMQLSGEISPDFSKIKSLQRIVLADNNLTGSIPVELTTLPRLSLLNVANNQLYGKVPSFRSNVVVSTNGNVDIGKDKSSQSPQGSVSPTAPNSKGENGGGSGNGGKKSSHVGVIVFSVIGAVFVVSMIGFLIFCLFRMKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSNVSVGGVSETRTIPGSEAGDIQMVEAGNMVISIQVLRNVTGNFSEKNILGQGGFGTVYRGELHDGTRIAVKRMECGAITGKGAAEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMHQGTLSRHLFNWPEEGLEPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMSINKDSFRKAIDSAIDLNEETLASIHTVAELAGHCCAREPYQRPDMGHTVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGKSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01714 948 Gene3D Phosphorylase Kinase; domain 1 556 671 - -
Vian7g01714 948 Gene3D Ribonuclease Inhibitor 32 329 IPR032675 -
Vian7g01714 948 MobiDBLite consensus disorder prediction 448 483 - -
Vian7g01714 948 FunFam Receptor-like kinase TMK4 33 327 - -
Vian7g01714 948 SUPERFAMILY L domain-like 64 438 - -
Vian7g01714 948 Gene3D Transferase(Phosphotransferase) domain 1 672 892 - -
Vian7g01714 948 FunFam Leucine-rich repeat receptor-like kinase 331 454 - -
Vian7g01714 948 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Vian7g01714 948 Pfam Leucine rich repeat N-terminal domain 33 65 IPR013210 -
Vian7g01714 948 Pfam Leucine rich repeat N-terminal domain 333 367 IPR013210 -
Vian7g01714 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Vian7g01714 948 PANTHER OSJNBA0070M12.3 PROTEIN 21 948 - -
Vian7g01714 948 MobiDBLite consensus disorder prediction 912 948 - -
Vian7g01714 948 MobiDBLite consensus disorder prediction 912 937 - -
Vian7g01714 948 FunFam receptor protein kinase TMK1 672 889 - -
Vian7g01714 948 SMART LRR_typ_2 114 137 IPR003591 -
Vian7g01714 948 SMART LRR_typ_2 262 286 IPR003591 -
Vian7g01714 948 SMART LRR_typ_2 189 212 IPR003591 -
Vian7g01714 948 CDD STKc_IRAK 600 873 - -
Vian7g01714 948 MobiDBLite consensus disorder prediction 448 482 - -
Vian7g01714 948 SMART serkin_6 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01714 948 Pfam Protein kinase domain 595 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01714 948 SUPERFAMILY Protein kinase-like (PK-like) 572 878 IPR011009 -
Vian7g01714 948 Gene3D Ribonuclease Inhibitor 330 455 IPR032675 -
Vian7g01714 948 FunFam receptor protein kinase TMK1 556 671 - -
Vian7g01714 948 ProSiteProfiles Protein kinase domain profile. 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g01714 948 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01714 Vian-Chr7 26867919 26871400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01714 80 876 Receptor kinase-like Gene Family AT5G07280 31.636 9.03e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vian7g01714 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g01714 K00924 - gmx:100789646 1610.51